Jatropha Genome Database

JcCA0144471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0144471.10 + phase: 0 
         (543 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29667.m000353 conserved hypothetical protein                          315   2e-85

>29667.m000353 conserved hypothetical protein
          Length = 591

 Score =  315 bits (159), Expect = 2e-85
 Identities = 264/299 (88%)
 Strand = Plus / Plus

                                                                       
Query: 157 gtctggaatcgggctggaacttgggaggagaaaaaccttaataaatgggcaactgatagg 216
           ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 151 gtctggaatcgggctggtacttgggaggagaaaagtcttaataaatgggcaactgatagg 210

                                                                       
Query: 217 ataaaggaacttcttgtgtcagttggctccttggagttctcctgtggcaaagctgaaata 276
           || ||||| || |||||| |||| |||||||||||||||||   |||||| |||||||| 
Sbjct: 211 attaaggagctgcttgtgacagtaggctccttggagttctctgctggcaaggctgaaatt 270

                                                                       
Query: 277 acagaagtgtcaaaatgtttgggtgacgcattcttggtgactgtgagaaacaagaaacga 336
            |||||||||| |||||||  || || || |||||||||||||| |||||||||||||||
Sbjct: 271 tcagaagtgtctaaatgttctggggatgccttcttggtgactgtcagaaacaagaaacga 330

                                                                       
Query: 337 gttggctatacttatgagttgacattgaaaatcaaaggggaatggacagtcaaagaggag 396
           ||||||||||| |||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 331 gttggctatacatatgagttgacattgaaaataaaaggagagtggactgtcaaagaggag 390

                                                                      
Query: 397 aaaaagaatgtgaaggcccatatagatatcccagagttttcttttggtgagctagatga 455
           |||||||  || |||||  |||| |||||||||||||| ||  ||||||||||||||||
Sbjct: 391 aaaaagacggttaaggctgatattgatatcccagagttctcaattggtgagctagatga 449