Jatropha Genome Database
- JcCA0144441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0144441.10 - phase: 0
(1101 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29904.m002984 3-ketoacyl-CoA thiolase B, putative 454 e-127
30204.m001789 3-ketoacyl-CoA thiolase B, putative 129 4e-29
>29904.m002984 3-ketoacyl-CoA thiolase B, putative
Length = 1383
Score = 454 bits (229), Expect = e-127
Identities = 415/477 (87%)
Strand = Plus / Plus
Query: 544 gctggtttggaatccatgacaattaatcaaatggcttgggatggagatgtgaatccaaaa 603
|||||| ||||||||||||| ||||||| |||| |||||||||||||||| ||||||||
Sbjct: 481 gctggtgtggaatccatgacgattaatccaatgtcttgggatggagatgtcaatccaaag 540
Query: 604 gtaaaaatcttcgagaaggctcaaaattgtcttctgcccatgggtgttacttcagaaaat 663
||||| || ||| | || || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 541 gtaaaggcatttgagcaagcccagaattgccttctgcccatgggtgtgacttcagaaaat 600
Query: 664 gttgcccatcgttttggagtgactagacaggagcaggatcaggctgctgttgagtctcat 723
||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 601 gttgcacatcgttttggagtgactagacaggagcaggatcaggctgcagtggactctcat 660
Query: 724 aggaaggctgctgcggctaccgctactggcaaattcaaggacgaaatcatccctgtggct 783
|||||||||||||| || || ||| |||| ||||||||||| ||||| | ||||| |||
Sbjct: 661 aggaaggctgctgccgccactgctgctggaaaattcaaggatgaaattgttcctgttgct 720
Query: 784 accaagattgtggacccaaaaactggtgatgagaaacctgtcacaatctcagttgatgat 843
||||||||||| |||||||| ||| |||| ||||||||| ||||| | || |||||||||
Sbjct: 721 accaagattgttgacccaaagactcgtgaggagaaacctatcacagtttctgttgatgat 780
Query: 844 gggattcgccctaacacatcattgtcagatctagcaaaattgaagcctgtatttaagaaa 903
|| || ||||| ||||||||| |||||||||| | ||| |||||||||||||||| |||
Sbjct: 781 ggtatacgccccaacacatcagtgtcagatcttggtaaactgaagcctgtatttaaaaaa 840
Query: 904 gatggaacaaccactgctgggaattctagccaaataactgacggtgctggggctgtgttg 963
||||| || |||||||||||||||||||||||| ||| ||| || |||||||||||||||
Sbjct: 841 gatgggaccaccactgctgggaattctagccaagtaagtgatggagctggggctgtgttg 900
Query: 964 ctcatgaaaagaagcgtggcaatgcgtaaagggctaccaatccttggtgtgttcagg 1020
|||||||| ||| | || ||||||| |||||||||||| |||||||| || ||||||
Sbjct: 901 ctcatgaagagatgtgttgcaatgcataaagggctacccatccttggagtattcagg 957
Score = 438 bits (221), Expect = e-122
Identities = 394/451 (87%), Gaps = 3/451 (0%)
Strand = Plus / Plus
Query: 29 ttcttctcgatcatctacgtccttcatcgtcttcttcg---cacaattatgagtcctctc 85
||||||||||||| || |||||||| || |||||||| || ||||| || || ||||
Sbjct: 29 ttcttctcgatcacctccgtccttcttcttcttcttctttacataattacgactcttctc 88
Query: 86 tttctgcatcggcttgcttggccggagacagtgccgcctatcaaaggactgctgtgtttg 145
|||||||||| ||||| | || || || || || || ||||| |||||| | || | ||
Sbjct: 89 tttctgcatcagcttgttcagcaggcgatagcgctgcttatcagaggacttcagtttatg 148
Query: 146 gggatgatgttgtgattgtggcagcttatagaactccgttatgcaagtcaaagcgcggtg 205
| ||||||||||||||||| ||||| |||||||| | || |||||||| ||||| ||||
Sbjct: 149 gagatgatgttgtgattgtagcagcacatagaactgctttgtgcaagtccaagcgtggtg 208
Query: 206 gtttcaaggatacccatgctgatgatttacttgctcctgttttgaaggcattgatagaga 265
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gtttcaaggatacctttgcggatgatttacttgctcctgttttgaaggcattgatagaga 268
Query: 266 aaacgaacttgaacgcaagtgaagtaggggatattgttgtgggcacagtgttggccccag 325
|||| || |||||| |||||||||| ||||||||||||||||| |||||||| || ||||
Sbjct: 269 aaactaaattgaacccaagtgaagttggggatattgttgtgggaacagtgttagcaccag 328
Query: 326 gatctcaaagagcaagtgaatgtaggatggctgcattctatgctggttttcctgaaactg 385
|||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 329 gatctcaaagagcaagcgaatgcaggatggctgcattctatgccggctttcctgaaactg 388
Query: 386 tgcctgttaggactgttaacaggcaatgttcgtctgggcttcaggcagttgctgatgtgg 445
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 389 tgcctattaggacagttaacaggcaatgttcgtctgggcttcaggcagttgctgatgtag 448
Query: 446 cagcagctatcaaagctgggttttatgacat 476
| || ||||||||||| || |||||||||||
Sbjct: 449 ctgctgctatcaaagcaggattttatgacat 479
>30204.m001789 3-ketoacyl-CoA thiolase B, putative
Length = 1404
Score = 129 bits (65), Expect = 4e-29
Identities = 263/329 (79%)
Strand = Plus / Plus
Query: 148 gatgatgttgtgattgtggcagcttatagaactccgttatgcaagtcaaagcgcggtggt 207
|||||||||||||| ||||| ||||| | ||| | | ||||| || ||||| |||||
Sbjct: 160 gatgatgttgtgatcgtggctgcttaccgtactgccatttgcaaatccaagcgacgtggt 219
Query: 208 ttcaaggatacccatgctgatgatttacttgctcctgttttgaaggcattgatagagaaa 267
||||||||||||||| ||||||| |||||| | |||||||||||| |||||||||||
Sbjct: 220 ttcaaggatacccatcctgatgacctacttggctcagttttgaaggcactgatagagaaa 279
Query: 268 acgaacttgaacgcaagtgaagtaggggatattgttgtgggcacagtgttggccccagga 327
|| || |||| ||| ||| || || ||||| |||||||| ||||| | || || ||
Sbjct: 280 accaatgtgaatccaaatgaggtgggtgatatagttgtgggtacagttctagctcctggg 339
Query: 328 tctcaaagagcaagtgaatgtaggatggctgcattctatgctggttttcctgaaactgtg 387
|| ||| |||| || || |||||||| || |||| ||||||||||||||||||||||
Sbjct: 340 tcagtaagggcaacagagtgcaggatggcagctttctttgctggttttcctgaaactgtg 399
Query: 388 cctgttaggactgttaacaggcaatgttcgtctgggcttcaggcagttgctgatgtggca 447
|| | || || || ||||||||||| || ||||| || ||||||||||||||||| ||
Sbjct: 400 cccatcagaacagtcaacaggcaatgctcatctggcctgcaggcagttgctgatgttgct 459
Query: 448 gcagctatcaaagctgggttttatgacat 476
|| |||| ||||| || |||||||||||
Sbjct: 460 gcttctataaaagcaggattttatgacat 488
Score = 91.7 bits (46), Expect = 8e-18
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 694 gagcaggatcaggctgctgttgagtctcataggaaggctgctgcggctaccgctactggc 753
||||| || |||||||||||||| ||||||||||| || ||||| || || || ||||
Sbjct: 652 gagcaagaccaggctgctgttgaatctcataggaaagcagctgctgcaacagcatctggt 711
Query: 754 aaattcaaggacgaaatcatccctgtggctaccaagattgtggacccaaaaactggtgat 813
||||||| || ||||||||||| || |||| ||||||||||||||||||||||| ||
Sbjct: 712 aaattcagagatgaaatcatcccagtttctacaaagattgtggacccaaaaactggcgaa 771
Query: 814 gagaaacctgtcacaatctcagttgatgatgggattcg 851
||||| ||||| |||| | || |||||||| |||||
Sbjct: 772 gagaagactgtctcaattttggtggatgatggtattcg 809