Jatropha Genome Database
- JcCA0143541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0143541.10 - phase: 0 /pseudo/partial
(936 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29713.m000179 conserved hypothetical protein 668 0.0
>29713.m000179 conserved hypothetical protein
Length = 2250
Score = 668 bits (337), Expect = 0.0
Identities = 733/864 (84%), Gaps = 12/864 (1%)
Strand = Plus / Plus
Query: 79 atcaggaaggagtatgatcggaaatgtaaccaactccggcaccaattcgccaaggatcat 138
||||||||||||||||| || |||||| | || || |||||||||| ||||| ||||||
Sbjct: 1390 atcaggaaggagtatgaccgaaaatgtgatcagcttaggcaccaatttgccaaagatcat 1449
Query: 139 agtgcccaagtgattgacaagactagagcagttgtgaaggatctacattcacggataata 198
||||| |||||||||||||||| | ||||| |||||||||||||||||| | ||||||
Sbjct: 1450 agtgctgaagtgattgacaagacccgggcagtagtgaaggatctacattcaagaataata 1509
Query: 199 gtggcaattcactccgttgatactatttcaaagaggattgagaaaatgagagatgaagaa 258
||||||||||| |||||||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 1510 gtggcaattcattccgttgatactatctcaaagcgaattgagaaaatgagagatgaagag 1569
Query: 259 ttgcagccacaacttctagagctaattcaagggctgatcaggatgtggaaggccatgctc 318
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1570 ttgcagccacaacttctagagctaatccaagggctgatcaggatgtggaaagccatgctt 1629
Query: 319 gaatgccatcattcacagtatatcaccatctcattggcataccactcaagaaatgctaca 378
|||||||||||| ||||||| || || |||||||||||||| || |||||||| | ||
Sbjct: 1630 gaatgccatcatgcacagtacattacaatctcattggcatatcattcaagaaacacaact 1689
Query: 379 ggaactcctcagggagatactcgcaggcagattatggctcagcttcaggaggagattgag 438
|||||||| |||||||||||||| ||||||||||||||| |||| || ||||| ||
Sbjct: 1690 ggaactccacagggagatactcgaaggcagattatggctgtgcttttagaagagatagaa 1749
Query: 439 tgttttggcttaagctttgcaaactgggtcaacagtctcgcatcctatgtggaagccctt 498
|| |||||||| ||||||||||||||||| | ||||| || |||||||||||||||||
Sbjct: 1750 tgctttggcttgagctttgcaaactgggttagcagtcatgcgtcctatgtggaagcccta 1809
Query: 499 aatggttggctacaacactgcatcttgcagccacaggagcgttccaagagcaggaaacca 558
||||| ||||| ||| |||||||| |||| ||||||||||||| || || ||||||||||
Sbjct: 1810 aatgggtggctgcaaaactgcatcctgcaaccacaggagcgttgcaggaacaggaaacca 1869
Query: 559 ttctcccctcgtcgagctgtggcgccacctatttttgttctctgtcgtgattggtcagct 618
|||||||| |||||||| | || |||||||||||| |||||| |||||||||||| |||
Sbjct: 1870 ttctccccgcgtcgagccctagccccacctatttttattctctctcgtgattggtctgct 1929
Query: 619 gggatcaaagctttgccatctgaggaacttagcaatgccattaaaaccttcttatttgac 678
|| ||||| |||||||||||||| | ||||| | ||||||| |||| ||||||| ||||
Sbjct: 1930 ggtctcaaatctttgccatctgagaagcttagtagtgccattcaaacattcttatctgac 1989
Query: 679 ttgtgtgatttaatggaccaacaag------tacaaaagaaagagaaatcagttgacgca 732
|||| ||||||||| ||| |||| ||||||||||||||| || || ||
Sbjct: 1990 ctgtgccatttaatgggccagcaagcagaactacaaaagaaagagagcaaagaagataca 2049
Query: 733 aacaatggagaatcagagggcaaagatgatgatgagaaaaatgatgagacctcgtcaaac 792
|| |||||||||| |||| ||||| || |||||||||| ||| | || ||||||
Sbjct: 2050 aagaatggagaattagagagcaaa---gaagatgagaaaagtgaag---tatcttcaaac 2103
Query: 793 ttgccgtgcatccaagcaagtttgacaaaggttcttgatagactaaacaaattttctgag 852
||| ||||| || || |||||| |||||||||||||||| || || ||||||||||||
Sbjct: 2104 ttgtgctgcatacatgctagtttgtcaaaggttcttgatagtctcaataaattttctgag 2163
Query: 853 gcttcgctgaaaatgtacgaggacattagacagagaagtgaagcagctcgattggcatac 912
||||| |||||||||||||||||||||||||||| ||| |||||||||||| |||| |||
Sbjct: 2164 gcttcactgaaaatgtacgaggacattagacagaaaagcgaagcagctcgagtggcgtac 2223
Query: 913 ttgaattgcaggccagctagatat 936
|| |||||||| |||| |||||||
Sbjct: 2224 ttaaattgcagaccagttagatat 2247