Jatropha Genome Database
- JcCA0143221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0143221.10 - phase: 0 /partial
(763 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014157 nucleic acid binding protein, putative 492 e-138
>30170.m014157 nucleic acid binding protein, putative
Length = 1386
Score = 492 bits (248), Expect = e-138
Identities = 620/744 (83%), Gaps = 15/744 (2%)
Strand = Plus / Plus
Query: 5 ggctgttcctgtcagaggaatctccttcgcaagttggtcttggtgcacaagatcacctcc 64
|||||||| || | |||||||||||||| |||||||| | ||||| |||||||||||||
Sbjct: 92 ggctgttcttgacggaggaatctccttcacaagttggattaggtgctcaagatcacctcc 151
Query: 65 aagcaaaagcatcatggctttcgcatccagctggcatagctgctgatgatattctgcctc 124
||||||| ||||||||| | || ||||||||||||| || || |||||||||||||||||
Sbjct: 152 aagcaaaggcatcatggttgtcacatccagctggcacagttggtgatgatattctgcctc 211
Query: 125 ctggctttgagggaggccaacctgccaaccaattgcatattaagttgtctgacattcctg 184
|||||||||| ||||| || | || || | || ||||||||||||| || ||||
Sbjct: 212 ctggctttgaaggaggtgctccagtgaatcagtcatatgttaagttgtctgatatccctg 271
Query: 185 taattaaatggaaatgtcctcccaggtttgttttggacttgacctggcaagtggttgcgg 244
|||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 272 taatcaaatggagatgtccacccaggtttgtcttggacttgacctggcaagtggttgcgg 331
Query: 245 gagaagaaagcaaagaggtggaggttcataatcagagagagatgagagtgcttgaagcag 304
|||||||||||||||| |||||||| || |||||| | |||||||||||||||||||| |
Sbjct: 332 gagaagaaagcaaagatgtggaggtccaaaatcagcgggagatgagagtgcttgaagctg 391
Query: 305 tttatcctcgtccatctgccattcctccaaatccggctttcagtgcagaactagaagact 364
|||||||||| |||||||||||||||||||| || |||||| |||||| ||||||| |
Sbjct: 392 tttatcctcggccatctgccattcctccaaaccccgctttcccagcagaagtagaagatt 451
Query: 365 taagactcaatgatcatcaagttcctctgattccaattactcccattgaagatgaagatg 424
| |||| ||||||||||||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 452 ttagacagggtgatcatcaagttcctcaaattcctattacacccatcgaagatgaagatg 511
Query: 425 cagtagatgcaccttctgagtttaggggaccgtataatgctcctgtgagctcacagtccc 484
| ||||| ||||||| || |||||||| | | || |||||||||||||||||||
Sbjct: 512 ccactgatgcgacttctgatttcaggggaccacagattgtccctgtgagctcacagtccc 571
Query: 485 aactattggcttctggaattctgccacctcaatacagtattcctgccatttcaaatactc 544
| ||||||||| | | || |||||| || || ||| |||||||||||||||
Sbjct: 572 atctattggctcc---actt------cctcaacgaagcatcccttccatttcaaatactc 622
Query: 545 ctgttaatgagaaacctgctgctggag------cactccttggcgttgaaccagatgtaa 598
| ||||||||||||||| |||||| | | ||| || |||||||| ||||||
Sbjct: 623 gtattaatgagaaacctgttgctggggtgctgcccgtccccggtgttgaacctgatgtag 682
Query: 599 tagctgctgcatctgctgcctttgctgccattaataaaagcaatgatcaaggaagtttga 658
||||||||||||||||||| |||||||| | |||||||||||||| || |||||||| |
Sbjct: 683 tagctgctgcatctgctgcttttgctgctgtgaataaaagcaatgagcagggaagtttaa 742
Query: 659 tagaccgtgatctgctcgtcaaaattctcaacaacccaagattgattaagaagttggctc 718
|||| | |||| ||||| |||||||||| |||||||||| |||||| ||||||||| ||
Sbjct: 743 tagatcatgatttgctcatcaaaattcttaacaacccaaaattgatagagaagttggttc 802
Query: 719 aagattatggagctgcctccaatg 742
||||||||||||||||||||||||
Sbjct: 803 aagattatggagctgcctccaatg 826