Jatropha Genome Database
- JcCA0142891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0142891.10 - phase: 0 /pseudo
(911 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28206.m000104 DNA binding protein, putative 446 e-124
29908.m006005 DNA binding protein, putative 129 3e-29
30190.m010825 DNA binding protein, putative 94 2e-18
29904.m002941 hypothetical protein 70 3e-11
29792.m000600 hypothetical protein 56 4e-07
30170.m014115 Dehydration-responsive element-binding protein 2G,... 52 6e-06
>28206.m000104 DNA binding protein, putative
Length = 1125
Score = 446 bits (225), Expect = e-124
Identities = 385/437 (88%), Gaps = 6/437 (1%)
Strand = Plus / Plus
Query: 244 ttttctcaagggttttctggttataaccaaatgggttttgagcaaacaggttcaataggg 303
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 283 ttttctcaagggttctctggttataaccaattgggttttgagcaaacaggttcaataggc 342
Query: 304 cttaatcatcttaccccatctcagattctccaaatccaagcccaaattcacttccaacaa 363
||||| || |||||||||||||| || |||||||||||||||||||| ||| | ||||||
Sbjct: 343 cttaaccaccttaccccatctcaaatcctccaaatccaagcccaaatccaccttcaacaa 402
Query: 364 caacaacagcaaattcctaatctttcttcaaattcacacttacttcataa---ccaaaga 420
|||||||| ||| | |||||| | ||||||| ||||| | ||||| | ||| |
Sbjct: 403 caacaaca---aatagcaaatcttgccacaaattcgaacttaatccataatgacaaaaaa 459
Query: 421 ctcagctacttggctccgaagcctgtttccatgaaacaatctgcctctccttcaaaacca 480
|||| |||| ||||| ||||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 460 ctcaagcacttagctccaaagcctgttccgatgaaacaatctgcctctcctccaaaacca 519
Query: 481 acaaaactttacagaggagtaaggcaaagacattggggcaagtgggttgctgaaattaga 540
|||||||| || |||||||||||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 520 acaaaactatatagaggagtaaggcagagacattggggcaaatgggtagctgagattaga 579
Query: 541 ctccctaaaaacagaacaagactctggcttggcacttttgacacagccgaagaagctgcc 600
|| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 580 cttcctaagaacagaacaagactttggcttggcacttttgacacagctgaagaagctgct 639
Query: 601 ttggcttatgacaaggctgcttataagctgagaggagaatttgccaggcttaattttcct 660
||||||||||||||||| ||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct: 640 ttggcttatgacaaggcagcttataagctaagaggtgaatttgctaggcttaactttcct 699
Query: 661 catcttcgccaccaagg 677
|||||||||||||||||
Sbjct: 700 catcttcgccaccaagg 716
Score = 91.7 bits (46), Expect = 7e-18
Identities = 99/116 (85%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 1 atggcagcagctatagatatctataatagc---aaaacagcaccagttttctctgttatg 57
|||||||||||||||||| | || | |||| | |||| || |||||||||| ||||
Sbjct: 1 atggcagcagctatagatttttacagtagcagtacaacaccatcagttttctcatttata 60
Query: 58 gatccctgtagagaagaattaatgaaagcgcttgaaccttttatgaaaagtgcttc 113
||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 61 gatccaggtagagaagaattattgaaagcacttgaaccttttatgaaaagtgcttc 116
>29908.m006005 DNA binding protein, putative
Length = 1152
Score = 129 bits (65), Expect = 3e-29
Identities = 134/157 (85%)
Strand = Plus / Plus
Query: 473 caaaaccaacaaaactttacagaggagtaaggcaaagacattggggcaagtgggttgctg 532
||||||| |||||||| || |||||||| ||||| |||||||||| || ||||| || |
Sbjct: 530 caaaacccacaaaactctatagaggagtgaggcagcgacattggggaaaatgggtagcag 589
Query: 533 aaattagactccctaaaaacagaacaagactctggcttggcacttttgacacagccgaag 592
| || ||||| || || ||| | ||||||||||||||||| ||||| ||||| || ||||
Sbjct: 590 agatcagactgccaaagaaccgtacaagactctggcttgggactttcgacactgcagaag 649
Query: 593 aagctgccttggcttatgacaaggctgcttataagct 629
||||||| ||||||||||||||||| |||||||||||
Sbjct: 650 aagctgctttggcttatgacaaggcggcttataagct 686
>30190.m010825 DNA binding protein, putative
Length = 948
Score = 93.7 bits (47), Expect = 2e-18
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 490 tacagaggagtaaggcaaagacattggggcaagtgggttgctgaaattagactccctaaa 549
||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||| ||
Sbjct: 337 tacagaggagtgaggcagagacattggggcaaatgggttgctgaaattagactacctcaa 396
Query: 550 aacagaa 556
|||||||
Sbjct: 397 aacagaa 403
>29904.m002941 hypothetical protein
Length = 1401
Score = 69.9 bits (35), Expect = 3e-11
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 493 agaggagtaaggcaaagacattggggcaagtgggttgctgaaattagactccctaaaaac 552
|||||||| |||||||| |||||||| || |||||||| || |||||| | || | ||||
Sbjct: 811 agaggagtgaggcaaaggcattggggaaaatgggttgcagagattagattaccaagaaac 870
Query: 553 agaacaagactctggcttggcacttttgacacagccgaagaagctgccttggcttatga 611
|||||||| | ||| | || || ||||| ||||| ||||||||||| ||||||||||
Sbjct: 871 agaacaagggtttggttagggacatttgatacagcagaagaagctgctatggcttatga 929
>29792.m000600 hypothetical protein
Length = 1317
Score = 56.0 bits (28), Expect = 4e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 565 tggcttggcacttttgacacagccgaagaagctgccttggcttatgac 612
||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 271 tggcttggcacttttgacacagcagaggaagctgcttgtgcttatgac 318
>30170.m014115 Dehydration-responsive element-binding protein 2G,
putative
Length = 744
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 562 ctctggcttggcacttttgacacagccgaagaagctgccttggcttatga 611
||||||||||| ||||||||||| || | ||||||||| ||||||||||
Sbjct: 199 ctctggcttggtacttttgacacctcccatgaagctgccatggcttatga 248