Jatropha Genome Database
- JcCA0142031.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0142031.30 - phase: 1 /pseudo/partial
(1142 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m009020 Protein AFR, putative 565 e-160
>30174.m009020 Protein AFR, putative
Length = 1062
Score = 565 bits (285), Expect = e-160
Identities = 504/578 (87%)
Strand = Plus / Plus
Query: 546 aggtgctattttgcttgtgaagttttggatggaagaatctatgccattggtggattaggt 605
|||||||||||||||||||||||| ||||||| | |||||| ||||||||||| ||||||
Sbjct: 463 aggtgctattttgcttgtgaagttatggatgggaaaatctacgccattggtgggttaggt 522
Query: 606 tcaaaactgagcgatccacattcttgggacactttcgatcctcataagaatagttgggaa 665
||||| |||||||||||||||||||||||||||| ||| |||| |||||| ||||||||
Sbjct: 523 tcaaagttgagcgatccacattcttgggacacttttgatgctcacaagaattgttgggaa 582
Query: 666 tcacattctgatggtaatgtcattcctgatgttgaagattccatagtattggatgggaag 725
||||||||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||
Sbjct: 583 tcacattctgatgctaacattgttcctgatgttgaggattccatagtcttggatgggaag 642
Query: 726 atttatattcgttgtggtgcttcttctgtgtcttctcacgtatatgctgttctctatgaa 785
|| || || ||||| ||||| || || ||| |||||| |||||||||||||| |||||
Sbjct: 643 atctacatccgttgcggtgcctcatcagtgagttctcatgtatatgctgttctttatgag 702
Query: 786 ccttcaaatggcacgtggcagcatgcagatgctgatatggtatcaggctggcgtggtcca 845
|||| ||||||||||||||| |||||||||| ||| |||| |||||| ||| | ||||||
Sbjct: 703 cctttaaatggcacgtggcaacatgcagatgttgacatggcatcaggttggaggggtcca 762
Query: 846 gcagttgttgtggatggtaccctttatgtgttggatcagagttcaggaaccaggttgatg 905
||||||||||||| || |||||||||| ||||||||||||||||||| ||| |||||
Sbjct: 763 gcagttgttgtggnnngttgcctttatgtgctggatcagagttcaggaacgaggctgatg 822
Query: 906 atgtggcagaaggataaaagggtatgggtggctgttggaaggttgtcagcattacttaca 965
|| |||| |||||||||||||| |||| |||| ||||||||| ||||| |||| ||||||
Sbjct: 823 atttggcggaaggataaaagggaatggatggcagttggaaggctgtcatcattgcttaca 882
Query: 966 agaccaccttgtcggcttgtagcaactgggaagaggatattcatcatcggtaagggactt 1025
||||| |||||||| ||||||||| |||||||||||||||||| || || |||||||||
Sbjct: 883 agaccgccttgtcgaattgtagcaattgggaagaggatattcattatagggaagggactt 942
Query: 1026 agcacggtggtgtttgacattgataaaactgggaatatggaaggggtactggtcagttct 1085
||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||
Sbjct: 943 agcacggtggtgtttgatattggcaaaactggaaatatggaaggggtgatggtcagttct 1002
Query: 1086 tccatacccaggataaattccgaggatgatataatcag 1123
||||||||| | |||| | ||||||||| |||||||
Sbjct: 1003 tccatacccggattaaactatgaggatgatgtaatcag 1040
Score = 420 bits (212), Expect = e-117
Identities = 397/456 (87%), Gaps = 2/456 (0%)
Strand = Plus / Plus
Query: 42 agaatcagtcaactagaagagagtcaagggccactgatttgtgggattccagatgacatt 101
||||||| |||| |||||||| |||||| | | ||||| | ||| |||| |||||||||
Sbjct: 11 agaatcactcaa-tagaagagggtcaagctcaattgattcgggggcttcctgatgacatt 69
Query: 102 gctcttttctgcttggcaagagtgcctcggaaatatcatacagtgctgaagtgcgtttgc 161
| |||||||||||||||||||||||| ||||| || || || ||||||||||| ||||||
Sbjct: 70 gttcttttctgcttggcaagagtgccgcggaagtaccacacggtgctgaagtgtgtttgc 129
Query: 162 aggagatggagagacttggtttgcaatgcagagtggcatgcttatcgtggaaagcacaat 221
||||||||||||||||| || |||| || ||||||| |||||||||| |||||||||
Sbjct: 130 aggagatggagagacttagtgtgcagtgaggagtggcgtgcttatcgtatgaagcacaat 189
Query: 222 ttgagtgagacttggatatatgctttgtgtcgtgacaagtttgagcgaatatgttgttat 281
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 190 ttgagtgagacttggatatatgctttgtgtcgtgacaagtttgaccagatatgttgttat 249
Query: 282 gtattggaccctgattcatcaagaagaagttggaagctcattcaagggcttccacctcgt 341
|| |||||||| ||||| |||||||| |||||||||| |||||||||||||| |||
Sbjct: 250 gtgttggaccccgattcttcaagaaggtgttggaagcttattcaagggcttccttctcac 309
Query: 342 tgtttgaaaagaaaaggtataggttttgaagcactggggaagaagcttttatctgttagg 401
|||||||| ||||||||||| ||||||||||| || |||||||||| |||| | |||||
Sbjct: 310 tgtttgaagagaaaaggtatgggttttgaagctctagggaagaagc-tttactttttagg 368
Query: 402 tggctgtggttggtcggaagatgctactgatgaagcctactgttatgatatttctagcaa 461
||| |||||||||| |||||||||||||||||||||||| || ||||| |||| || ||
Sbjct: 369 tggttgtggttggttggaagatgctactgatgaagcctattgctatgacgtttcaaggaa 428
Query: 462 ctcatggactgaagctgcttccttgtctactgcaag 497
||| |||||||||||| ||||||||||||| |||||
Sbjct: 429 ctcttggactgaagctacttccttgtctacagcaag 464