Jatropha Genome Database
- JcCA0141381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0141381.10 + phase: 1 /partial
(662 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003742 proteasome subunit alpha type, putative 654 0.0
29158.m000192 proteasome subunit alpha type, putative 472 e-132
>29739.m003742 proteasome subunit alpha type, putative
Length = 741
Score = 654 bits (330), Expect = 0.0
Identities = 570/650 (87%)
Strand = Plus / Plus
Query: 9 atgagtagaggaagtggaggtggttacgatcgccatatcacaatcttctcccctgaaggt 68
|||||||||||||| |||||||| |||||||| || ||||| || ||||| |||||||||
Sbjct: 1 atgagtagaggaagcggaggtggctacgatcgtcacatcaccattttctctcctgaaggt 60
Query: 69 cgtcttttccaagtcgaatatgcgtttaaggctgtaaaggcagctgccatcacttcgatc 128
||||| ||||||||||||||||| |||||||| || ||||||||||| | || || ||
Sbjct: 61 cgtctcttccaagtcgaatatgcatttaaggcagtgaaggcagctgcagtaacgtcaatt 120
Query: 129 ggagttcgcggaaaggactctgtctgtgttgtcacgcagaagaaagttccagacaagctt 188
|||||||| || || |||||||| |||||||| || || ||||||||||| |||||||||
Sbjct: 121 ggagttcgtggtaaagactctgtttgtgttgtaactcaaaagaaagttccggacaagctt 180
Query: 189 ttggatcagactagtgttacccacctttttcctattaccaagtaccttggattattggct 248
||||||||||||||||| || || || || |||||||||||||||||||||||| | |||
Sbjct: 181 ttggatcagactagtgtcactcatctcttccctattaccaagtaccttggattacttgct 240
Query: 249 actggcatgaccgctgatgcaagaactttggtccagcaagcacggaatgaggcagctgag 308
|| |||||||| |||||||| || |||||||| || |||||| ||||||| |||||||||
Sbjct: 241 accggcatgactgctgatgctaggactttggtgcaacaagcaaggaatgaagcagctgag 300
Query: 309 tttcgtttcagatatggatatgaaatgcctgtagatgtattggccaaatggatagcagat 368
|| || |||||||||||||||||||||||||| || |||||||| | |||||| |||||
Sbjct: 301 ttccggttcagatatggatatgaaatgcctgtggacgtattggcaagatggattgcagac 360
Query: 369 aaatcacaggtttacactcagcatgcttacatgagaccccttggagtagttgctatggtc 428
||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 361 aaatctcaggtttatactcagcatgcttacatgagacccctgggagtaattgctatggtt 420
Query: 429 ttgggcattgatgaggagaatgggcctcagctctacaagtgtgatccagctggccacttc 488
||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 421 ttgggtattgatgaggagaatgggcctcaactctacaaatgtgatccagcgggccacttt 480
Query: 489 tacggtcacaaggccacaagtgctggattgaaagaacaagaggctattaattttttggaa 548
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||| || ||
Sbjct: 481 tttggtcacaaggctacaagtgctggattaaaagaacaagaggctatcaatttcttagag 540
Query: 549 aagaaaatgaaaaatgaccctgctttctcctatgaggaaactgtgcagactgccatttcg 608
||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||
Sbjct: 541 aagaaaatgaaaaatgaccgagctttcacgtatgaggaaactgtgcagactgctatttct 600
Query: 609 gctctacaatctattctgcaagaggacttcaaggctactgagattgaggt 658
||| | |||||| | || || |||||||||||||| || |||||||||||
Sbjct: 601 gctttgcaatctgtccttcaggaggacttcaaggccaccgagattgaggt 650
>29158.m000192 proteasome subunit alpha type, putative
Length = 741
Score = 472 bits (238), Expect = e-132
Identities = 547/650 (84%)
Strand = Plus / Plus
Query: 9 atgagtagaggaagtggaggtggttacgatcgccatatcacaatcttctcccctgaaggt 68
|||||||| ||||| || || || |||||||| || ||||| ||||| || || |||||
Sbjct: 1 atgagtaggggaagcgggggaggatacgatcgtcacatcacgatcttttcaccggaaggc 60
Query: 69 cgtcttttccaagtcgaatatgcgtttaaggctgtaaaggcagctgccatcacttcgatc 128
|||||||| ||||| |||||||| ||||||||||| ||||| ||| |||| || ||
Sbjct: 61 cgtctttttcaagttgaatatgcttttaaggctgttaaggcttctggggtcacctcaatt 120
Query: 129 ggagttcgcggaaaggactctgtctgtgttgtcacgcagaagaaagttccagacaagctt 188
|| ||| | || ||||| ||||||||||| || || ||||||||||| || ||||||||
Sbjct: 121 ggtgtttgtgggaaggattctgtctgtgtggtgactcagaagaaagtacctgacaagctc 180
Query: 189 ttggatcagactagtgttacccacctttttcctattaccaagtaccttggattattggct 248
||||| || || ||||| || || |||||||| ||||| ||||||||||| || | ||
Sbjct: 181 ttggaccatacaagtgtcacacatctttttcccattacaaagtaccttggcttgctagca 240
Query: 249 actggcatgaccgctgatgcaagaactttggtccagcaagcacggaatgaggcagctgag 308
||||||||||| |||||||| || || ||||| || |||||| ||||||| ||||| |||
Sbjct: 241 actggcatgacagctgatgcgaggaccttggttcaacaagcaaggaatgaagcagcagag 300
Query: 309 tttcgtttcagatatggatatgaaatgcctgtagatgtattggccaaatggatagcagat 368
||||| |||| |||||||||||| |||||||| ||||| ||||| |||||||||||||||
Sbjct: 301 tttcgcttcaaatatggatatgagatgcctgtggatgttttggctaaatggatagcagat 360
Query: 369 aaatcacaggtttacactcagcatgcttacatgagaccccttggagtagttgctatggtc 428
|||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 aaatcacaaatttatacacagcatgcttatatgagaccccttggagtagttgctatggta 420
Query: 429 ttgggcattgatgaggagaatgggcctcagctctacaagtgtgatccagctggccacttc 488
|||||||||||||| || |||||||| || || |||||||| || ||||||||||||
Sbjct: 421 ttgggcattgatgatgaatatgggcctagactatataagtgtgaccctgctggccacttc 480
Query: 489 tacggtcacaaggccacaagtgctggattgaaagaacaagaggctattaattttttggaa 548
| ||| |||||||| |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 481 ttcggccacaaggctacaagtgcgggattaaaagaacaagaagcaattaattttttggag 540
Query: 549 aagaaaatgaaaaatgaccctgctttctcctatgaggaaactgtgcagactgccatttcg 608
||||||||||| ||||| ||||| || |||||||||| || ||||||||||| |||||
Sbjct: 541 aagaaaatgaagaatgatcctgcatttacctatgaggagacagtgcagactgcaatttct 600
Query: 609 gctctacaatctattctgcaagaggacttcaaggctactgagattgaggt 658
|| || ||||| |||| || ||||| |||||||||||||||||||||||
Sbjct: 601 gccctgcaatcagttctacaggaggatttcaaggctactgagattgaggt 650