Jatropha Genome Database
- JcCA0141071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0141071.10 + phase: 0 /partial
(1044 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004035 conserved hypothetical protein 991 0.0
29827.m002590 conserved hypothetical protein 68 1e-10
>30138.m004035 conserved hypothetical protein
Length = 4653
Score = 991 bits (500), Expect = 0.0
Identities = 846/961 (88%), Gaps = 9/961 (0%)
Strand = Plus / Plus
Query: 10 cctcccccaccgctgcctggaggtagaggtccgcctcccccacctcctcctggaggctgt 69
||||||||||| | |||||| || |||| || ||||||||||||||||||||||| ||
Sbjct: 3205 cctcccccacctcctcctggacgtggaggcccacctcccccacctcctcctggaggacgt 3264
Query: 70 gttcctggtcctcctgctccacctggaggtccaggtggtggaccccctccacctcctccc 129
|||||||| || |||||||||||| || |||||||| |||||||||||||||||| |||
Sbjct: 3265 gttcctggcccgcctgctccacctagacctccaggtgctggaccccctccacctcccccc 3324
Query: 130 tttggtggcaaaggagctgcagctgatacgagaggcctagcttctggaagaggacgtggt 189
|| |||| ||||||||||||| ||||||| |||||| |||||||||||||||| ||||||
Sbjct: 3325 ttaggtgccaaaggagctgcaactgatacaagaggcttagcttctggaagagggcgtggt 3384
Query: 190 ------cgtggttcagggatgggttcagctgctggagcacctagaagatcatccttaaag 243
|| | | |||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 3385 tattcacgccctcctgggatgggttcaactgccacagcacctagaagatcttccttaaag 3444
Query: 244 cctttgcattggagcaaggtaacaagggcactgcaaggaagtttgtgggaggagctgcag 303
||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 3445 cctctgcattggagcaaggtaacaagggcaatacaaggaagtttgtgggaggagctgcaa 3504
Query: 304 agacatggggagccccaaattgcgcccgaatttgatgtgtcagagctagagacccttttt 363
||||||| ||||||||||||||| || ||||||||||||||||||||||||| || ||
Sbjct: 3505 agacatgcggagccccaaattgcaccggaatttgatgtgtcagagctagagagtctcttc 3564
Query: 364 tctgcaacagtccctaaatctgctagttcaggagataaagatgggggaagacgcaagtct 423
|||||||||||||| ||| ||||| ||| || ||||| ||| |||||||||||||||
Sbjct: 3565 tctgcaacagtcccaaaagctgctgattctgg---taaagctggaggaagacgcaagtct 3621
Query: 424 gctggatcaaaaacagacaaagttcacctgattgacctgaggagggccaataacactgaa 483
| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3622 gttggatcaaaaactgacaaagttcacctgattgacctaaggagggccaataacactgaa 3681
Query: 484 attatgctcacaaaagttaagatgccactgtctgacatgatggctgcagttctagctatg 543
||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||| |||
Sbjct: 3682 attatgctcacaaaagtcaagatgccattatctgatatgatggctgcagttctagcaatg 3741
Query: 544 gatgactcaatattagatgccgaccaagtggaaaatctaataaaattctgtcctactaag 603
||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||| ||
Sbjct: 3742 gatgagtcaattttagatgctgatcaagtggaaaatcttataaaattctgtcctacgaaa 3801
Query: 604 gaggagatggaacaactcaagaattacactggcgacaaggagaacctgggaaagtgtgaa 663
||||||||||||| |||||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 3802 gaggagatggaacttctcaagaattactctggagacaaagaaaacctgggaaagtgtgaa 3861
Query: 664 cagtattttctggagctgatgaaggtgcctcgtgttgagtcgaaaatgagagtattttct 723
||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 3862 cagtattttctggagctgatgaaagtgcctcgtgttgagtcaaaattgagagtattttct 3921
Query: 724 ttcaagattcagttcggctctcagatattggaatttaaaaagagcctgaacacagtaaac 783
||||||||||| ||| ||||||||||| |||||||| |||||| | ||||||||||||
Sbjct: 3922 ttcaagattcaattcaactctcagatatcagaatttaagaagagcttaaacacagtaaac 3981
Query: 784 tctgcatgtgaagaggttcgaaattccctcaagttgaaggacattatgaagaagatcctt 843
|||||||||||||||||||||| |||||||||||||||||| ||||||| | || ||
Sbjct: 3982 tctgcatgtgaagaggttcgaagttccctcaagttgaaggagattatgaggttcattcta 4041
Query: 844 tatttagggaatacactgaaccaaggaactgcaaggggttcagcaattggatttaagttg 903
|||||| ||||| |||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 4042 attttaggcaatacgttgaaccaaggaactgccaggggttcggcaattggattcaagttg 4101
Query: 904 gacagtcttttaaaacttactgatacacgtgcttctaacagcaaaatgacacttatgcat 963
||||||||| | ||||| |||||||| || |||||||| ||||| |||||||| ||||||
Sbjct: 4102 gacagtcttctcaaactcactgatacccgggcttctaatagcaagatgacactcatgcat 4161
Query: 964 t 964
|
Sbjct: 4162 t 4162
>29827.m002590 conserved hypothetical protein
Length = 696
Score = 67.9 bits (34), Expect = 1e-10
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 577 aatctaataaaattctgtcctactaaggaggagatggaacaactcaagaattacactggc 636
||||| || ||||||||||| |||||||| || ||||| | | |||||||| || ||
Sbjct: 268 aatctcatcaaattctgtcccactaaggaagaaatggagacattgaagaattatacaggt 327
Query: 637 gacaaggagaacctgggaaagtgtgaacagtattttctggagctgatgaa 686
|||||||| | |||| ||||||||||||| ||||||||||||||||||
Sbjct: 328 gacaaggaaatgttggggaagtgtgaacagttttttctggagctgatgaa 377