Jatropha Genome Database
- JcCA0140991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0140991.10 + phase: 0
(864 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28271.m000023 DNA binding protein, putative 341 4e-93
30066.m000714 r2r3-myb transcription factor, putative 84 2e-15
29917.m001986 r2r3-myb transcription factor, putative 74 2e-12
30076.m004607 r2r3-myb transcription factor, putative 72 6e-12
28154.m000040 r2r3-myb transcription factor, putative 64 1e-09
29823.m000215 r2r3-myb transcription factor, putative 56 4e-07
>28271.m000023 DNA binding protein, putative
Length = 781
Score = 341 bits (172), Expect = 4e-93
Identities = 355/416 (85%)
Strand = Plus / Plus
Query: 70 cttaggagaggtccatggacccttgaagaagactctcttcttgttcattacattgcttgc 129
||||| ||||| |||||||| ||||||||||| | || || ||||| | ||||||| |
Sbjct: 76 cttagaagagggccatggacacttgaagaagataccctcctagttcactgcattgctagt 135
Query: 130 catggcgagggtcgatggaatttgctcgcaaaacgtgctggattgagaagaacaggcaag 189
|||||||| || |||||||||||||| || |||||||| ||||| | ||||| ||||||
Sbjct: 136 catggcgaaggccgatggaatttgcttgcgaaacgtgcaggattacgtagaaccggcaag 195
Query: 190 agctgtagacttagatggctaaactatctaaaaccagatgtcaagcgaggaaatcttacc 249
|| || ||||| ||||||||||| ||||||||||||||||| ||||| || || |||||
Sbjct: 196 agttgcagactgagatggctaaattatctaaaaccagatgttaagcgcggtaaccttact 255
Query: 250 ccacaggaacaactcttgattcttgatcttcattccagatggggtaacaggtggtcaaag 309
||||||||||| || |||||||||||||||||||| | | ||||||||||||||| ||
Sbjct: 256 ccacaggaacagcttttgattcttgatcttcattctaagttgggtaacaggtggtcgaaa 315
Query: 310 attgcacagcatttaccaggaagaactgataatgaaatcaagaattactggagaacaaga 369
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |
Sbjct: 316 attgcacagcatttaccaggaagaacagataatgaaatcaagaactattggagaacccgg 375
Query: 370 gtgcaaaaacaagcaaggcatctcaaggtagatgcaaatagcagagcatttcaagatata 429
||||| ||||||||||||||||| ||| ||||||| ||||||| ||| |||||||| |||
Sbjct: 376 gtgcagaaacaagcaaggcatcttaagatagatgccaatagcacagcttttcaagaaata 435
Query: 430 attagatatttttggatgccaagattaattcagaaaattgaaggatcatcttcttc 485
|||| | ||||||||| |||||||| |||| || || ||||||||| |||||||
Sbjct: 436 gttaggtgtttttggataccaagattgcttcaaaagatagaaggatcaacttcttc 491
>30066.m000714 r2r3-myb transcription factor, putative
Length = 915
Score = 83.8 bits (42), Expect = 2e-15
Identities = 177/222 (79%)
Strand = Plus / Plus
Query: 79 ggtccatggacccttgaagaagactctcttcttgttcattacattgcttgccatggcgag 138
||||||||||| ||||||||||| || | || |||||||||| || ||||||| ||
Sbjct: 73 ggtccatggactcttgaagaagatactttactcactcattacatttctcgccatggtgaa 132
Query: 139 ggtcgatggaatttgctcgcaaaacgtgctggattgagaagaacaggcaagagctgtaga 198
||||| |||||| || | |||||| ||| ||| ||| ||||| || ||||| || |||
Sbjct: 133 ggtcgttggaatatgttagcaaaatatgcaggactgaagagaactggaaagagttgcaga 192
Query: 199 cttagatggctaaactatctaaaaccagatgtcaagcgaggaaatcttaccccacaggaa 258
| |||||||||| ||| ||||||| || | ||||| ||||| ||||| ||||| |||
Sbjct: 193 ttacgatggctaaattatttaaaacctgacattaagcgtggaaaccttactccacaagaa 252
Query: 259 caactcttgattcttgatcttcattccagatggggtaacagg 300
||||||||||||||||| || || || | ||||||||||||
Sbjct: 253 caactcttgattcttgaactgcactctaagtggggtaacagg 294
>29917.m001986 r2r3-myb transcription factor, putative
Length = 489
Score = 73.8 bits (37), Expect = 2e-12
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 289 tggggtaacaggtggtcaaagattgcacagcatttaccaggaagaactgataatgaaatc 348
||||| |||||||||||||| || ||| ||||| | |||||||| || |||||||||||
Sbjct: 169 tggggaaacaggtggtcaaaaatcgcaaagcatcttccaggaaggacggataatgaaata 228
Query: 349 aagaattactggagaacaaga 369
||||| |||||||| ||||||
Sbjct: 229 aagaactactggaggacaaga 249
>30076.m004607 r2r3-myb transcription factor, putative
Length = 795
Score = 71.9 bits (36), Expect = 6e-12
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 256 gaacaactcttgattcttgatcttcattccagatggggtaacaggtggtcaaagattgca 315
||||| || ||||||||||| || ||||| | ||||| |||||||||||||| || ||
Sbjct: 247 gaacagctgttgattcttgaactccattctcgttggggcaacaggtggtcaaaaatagcg 306
Query: 316 cagcatttaccaggaagaactgataatgaaatcaagaattactggagaacaagagtgcaa 375
||| | || || |||||||| || ||||| || ||||| |||||||| |||||||| |||
Sbjct: 307 cagtacttgcctggaagaacagacaatgagataaagaactactggaggacaagagtacaa 366
Query: 376 aaacaagc 383
|| |||||
Sbjct: 367 aagcaagc 374
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 322 ttaccaggaagaactgataatgaaatcaagaattactgga 361
|||||||||||||| ||||||||||||||||| |||||||
Sbjct: 286 ttaccaggaagaacagataatgaaatcaagaactactgga 325
>29823.m000215 r2r3-myb transcription factor, putative
Length = 1584
Score = 56.0 bits (28), Expect = 4e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 322 ttaccaggaagaactgataatgaaatcaagaattactgga 361
|||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 331 ttaccaggtagaacagataatgaaatcaagaatttctgga 370