Jatropha Genome Database

JcCA0140861.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0140861.10 - phase: 0 /pseudo/partial
         (422 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29804.m001506 Palmitoyltransferase TIP1, putative                     357   3e-98

>29804.m001506 Palmitoyltransferase TIP1, putative
          Length = 1638

 Score =  357 bits (180), Expect = 3e-98
 Identities = 309/352 (87%)
 Strand = Plus / Plus

                                                                        
Query: 44   caaatcttcccaaggtaactgctgttgttggactttggggatttactgctctttctctag 103
            |||||||||| ||||||||||||||||||||||| ||||| |   |||||||||||||  
Sbjct: 890  caaatcttccaaaggtaactgctgttgttggactatgggggtgggctgctctttctcttt 949

                                                                        
Query: 104  ctgtcgtttcactgattatgttctacaggtgtagtagtagagatccaggtttcatcaaga 163
            ||||  || || |||| ||||||||| | |||||||| |||||||||||||| || || |
Sbjct: 950  ctgttcttgcattgatcatgttctaccgatgtagtagcagagatccaggttttattaaaa 1009

                                                                        
Query: 164  gacttgaagatttgggtaaagatgcagatatcgaggatcctttattaaatattgatctga 223
            ||||||||||||||||||||||||||||||  ||||||||  |||| ||| | |||||||
Sbjct: 1010 gacttgaagatttgggtaaagatgcagatacagaggatcccctattgaatgtcgatctga 1069

                                                                        
Query: 224  actactcctctatatggatggggaattggtctcaactttgccctacctgcaagataatta 283
            |  |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 ataactcctccgtgtggatggggaattggtctcaactttgccctacctgcaagataatta 1129

                                                                        
Query: 284  gacctgttcgctccaagcattgctctacgtgtaagcgttgtgttgagcagtttgaccatc 343
            |||| |||||||||||||| ||| || | |||||||| ||||| |||||||||||||| |
Sbjct: 1130 gacccgttcgctccaagcactgccctgcatgtaagcgctgtgtggagcagtttgaccacc 1189

                                                                
Query: 344  actgcccatggatatctaattgtgtggggaagaggaataaacgggatttctt 395
            | ||||||||||||||||||||||||||||||||||| | |||||| |||||
Sbjct: 1190 attgcccatggatatctaattgtgtggggaagaggaacagacgggacttctt 1241