Jatropha Genome Database

JcCA0140751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0140751.10 + phase: 0 
         (714 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001158 sphingolipid fatty acid alpha hydroxylase                72   5e-12

>30075.m001158 sphingolipid fatty acid alpha hydroxylase
          Length = 714

 Score = 71.9 bits (36), Expect = 5e-12
 Identities = 141/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 11  agggattcactgttgatctctgtaagcctcatctcttccaggttggttaccttggagaac 70
           |||| |||||||||||||||   ||||||| | |||||||||||||  | ||||||||  
Sbjct: 11  agggcttcactgttgatctcaacaagcctcttgtcttccaggttggccatcttggagagg 70

                                                                       
Query: 71  attatgatggatgggttcaccagcctattataacaaaggaaagccctcggtttttccaga 130
            |||||| | ||||||||||||||| ||| |||  | |||| ||||||| |||||  |||
Sbjct: 71  cttatgaggaatgggttcaccagccaattgtaagcagggaaggccctcgattttttgaga 130

                                                                   
Query: 131 gtgagattttggagtgggtgactcggtcagtttggtgggtagttccagtaatttgg 186
           ||||  ||| |||||   ||||||   |||||||||||| ||| ||||| ||||||
Sbjct: 131 gtgatttttgggagttcttgactctcacagtttggtgggcagtaccagttatttgg 186



 Score = 71.9 bits (36), Expect = 5e-12
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 474 caccccctcaactgctcctgctgtatttggaggtactttgctgggttatgtgatctatga 533
           |||||||||||||||||||||| | |||||||||  |||  | ||||||||||| |||||
Sbjct: 474 caccccctcaactgctcctgctttgtttggaggtggtttattaggttatgtgatgtatga 533

                                               
Query: 534 cttgactcactactatttacatcatggtcaaccctc 569
            |  ||||| ||||| || ||||||||||| |||||
Sbjct: 534 ttgcactcattactacttgcatcatggtcagccctc 569