Jatropha Genome Database

JcCA0139851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0139851.10 + phase: 0 
         (567 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000794 calcium ion binding protein, putative                   161   6e-39

>30008.m000794 calcium ion binding protein, putative
          Length = 552

 Score =  161 bits (81), Expect = 6e-39
 Identities = 344/431 (79%), Gaps = 3/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagagatatcagagacagcaaaagcttattatgcaaacttatcagaaaagcagaag 60
           ||||| |||||||||||||| || |||||||| || |||||||| ||||| | |||||||
Sbjct: 1   atggaggagatatcagagactgctaaagcttactacgcaaacttgtcagacaggcagaag 60

                                                                       
Query: 61  cgattagcaaaagattttttcaacgaaatggataaagatggagatggaaaaattactttc 120
           ||| | |  ||||| |||||| | | |||||||| |||||||||||| ||||| ||  ||
Sbjct: 61  cgacttgggaaagaatttttccaagcaatggatacagatggagatggcaaaatcacgctc 120

                                                                       
Query: 121 gatgaatatgagcaacgcattaagccaaagaaaggctttaatccaattgcttcttcggat 180
           || || |||| |||  |||||||   ||||||||| || ||  ||||| ||||| | |||
Sbjct: 121 gaagagtatgcgcagtgcattaaagaaaagaaagggttcaaaacaatttcttctcctgat 180

                                                                       
Query: 181 ttctttaggaagctcgataaggacggaaatggcacattggatttcgacgaatttgtgact 240
           |||||||  ||||| || || || ||||| || ||  ||||||| || |||||| | |  
Sbjct: 181 ttctttaaaaagctagacaaagatggaaacgggacgctggattttgatgaatttatcatc 240

                                                                       
Query: 241 ttacactacatatgcgcaaccagaagagttttctattgcgatgagtgtagagtctttctt 300
            | |||||||||||| | |||  |||||||| || ||| |||||||||| ||| ||||| 
Sbjct: 241 gttcactacatatgctccaccgaaagagtttacttttgtgatgagtgtaaagtatttcta 300

                                                                       
Query: 301 gatagggtctattttacttgtgtccagtgcttcaatggctccggtaatacttatgatctc 360
           | | | || || || ||||| || ||||||||||||||||| ||||||||||| ||||| 
Sbjct: 301 gctggagtttacttcacttgcgttcagtgcttcaatggctctggtaatacttacgatctt 360

                                                                       
Query: 361 tgtgtttcttgctatcgcgataagaatatcattaatcatcacaaggatgctgtgtttctc 420
           ||   |||||| ||||| ||||||||||||   || ||||| ||||||||| ||||||| 
Sbjct: 361 tgctcttcttgttatcgtgataagaatatc---aaccatcataaggatgctctgtttctt 417

                      
Query: 421 gataattacac 431
           |||||||||||
Sbjct: 418 gataattacac 428