Jatropha Genome Database
- JcCA0138521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0138521.10 - phase: 0 /partial
(729 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29613.m000361 DNA polymerase delta small subunit, putative 593 e-169
>29613.m000361 DNA polymerase delta small subunit, putative
Length = 1278
Score = 593 bits (299), Expect = e-169
Identities = 584/679 (86%)
Strand = Plus / Plus
Query: 50 cctccttggatgagacgtttaagattcaaaaagaaacatacagaggccaacaatacagcc 109
|||| ||||||||||| | | |||||||||| || || |||||||| || ||||||||||
Sbjct: 50 cctcattggatgagacatatgagattcaaaatgagacgtacagagggcagcaatacagcc 109
Query: 110 aaatttactttgctcgtctccatatgatgagaactcttctctattctcttgtaccccact 169
|||| |||||||||||||| || ||||| |||||| | |||||||||||||| || | |
Sbjct: 110 aaatatactttgctcgtcttcacatgattagaactttgctctattctcttgttcctcttt 169
Query: 170 ggaaaaatcatttaactgtttgtacgattttgggattggaagaagggaaggaatgcatca 229
||||| ||||| ||||||| || |||||||| ||| |||||| |||||||| ||||
Sbjct: 170 ggaaatcccatttgcctgtttgcacagttttgggactggtagaaggcaaggaatgtatca 229
Query: 230 ttgttggaacattgtataagcacatgaaacttaaaccttgcattctcgatgagtattcta 289
|||| |||||||||||||||||||||||||| ||||| || ||||| |||||||| ||||
Sbjct: 230 ttgtcggaacattgtataagcacatgaaactcaaaccctgtattcttgatgagtactcta 289
Query: 290 aggagagatctgcagtgcctctggtcaaacctcacaatttcatgcatccagatgattatt 349
| |||||||||||| | || |||||||| ||||| ||||| ||||| | |||||| |||
Sbjct: 290 aagagagatctgcaattccactggtcaagcctcataattttatgcacctggatgatcatt 349
Query: 350 tagttttggaagatgagagtggtagagtaaagcttggaggcgatatgctttcaccttcag 409
|||||||||||||||||||||| ||||| ||||||||||| ||||||||| | |||||||
Sbjct: 350 tagttttggaagatgagagtggaagagtcaagcttggaggtgatatgcttacgccttcag 409
Query: 410 catatgtcacaggcgtcgttgttgctttacatggaaaggaaactagtgctggtgacttct 469
||||||| |||||| | ||||||||||| ||||||||||||||| |||| || ||||||
Sbjct: 410 catatgtaacaggccttgttgttgctttgcatggaaaggaaactggtgcaggcgacttca 469
Query: 470 tagttctggatgtccttgaagctggcctggcaccacagatagagctgccacttcagccaa 529
| ||||| |||||||| |||||||| ||| ||||||||||||| |||||||||||| |||
Sbjct: 470 tggttcttgatgtcctcgaagctggtctgccaccacagatagaactgccacttcagtcaa 529
Query: 530 gagaggacaagtatgtggtttttgtttctgggctcagtcttggaagcatcagatccaacc 589
|||||||||||||||| ||||||||||||||||| | | |||| |||| || || ||||
Sbjct: 530 gagaggacaagtatgtagtttttgtttctgggctgaatgttgggagcagcacatttaacc 589
Query: 590 cacttcagtttcagcttcttgttgatcatataacaggacatctaggagatgaacaggaac 649
| || || ||||||||||| ||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 590 ctctccaatttcagcttctggttgatcatataacagggcatctaggaaatgagaaggaac 649
Query: 650 aaggtattgtagcagagatagtccatgtagtagttgcagggaattcagttgaaatccctg 709
||| ||||| |||||||||||| ||||| || |||| ||||||||||||||||| |||
Sbjct: 650 aagctattgcagcagagatagttcatgtcgtgattgctgggaattcagttgaaattcctc 709
Query: 710 ttggacttcttaatggaca 728
||||||||||||||||||
Sbjct: 710 atggacttcttaatggaca 728