Jatropha Genome Database
- JcCA0137431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0137431.10 - phase: 0
(1293 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003665 26S protease regulatory subunit, putative 1471 0.0
29884.m000185 26S protease regulatory subunit, putative 498 e-140
>29739.m003665 26S protease regulatory subunit, putative
Length = 1293
Score = 1471 bits (742), Expect = 0.0
Identities = 1138/1270 (89%)
Strand = Plus / Plus
Query: 22 gaagatgatgagataatcaaggacgagaagaatcctcgtcctcttgatgaagacgatatt 81
||||| |||||||| || ||||||||||||||||| | |||||| || |||| ||| |||
Sbjct: 22 gaagacgatgagatcataaaggacgagaagaatccacctcctctcgacgaaggcgacatt 81
Query: 82 gccctcctcaagacctatggtttaggtccatattcaaacagcattaagaaagaggagaag 141
||||| ||||| |||||||| || |||||||| ||||||||||| |||||||||||||||
Sbjct: 82 gcccttctcaaaacctatggattgggtccatactcaaacagcatcaagaaagaggagaag 141
Query: 142 gaaatcaaggaactggctaagaagatcaatgacctctgtggtatcaaggaatcggacact 201
||||||||||| |||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 142 gaaatcaaggatttggctaagaaaattaacgacctttgcggtataaaggaatctgacact 201
Query: 202 gggttagctgcaccaagtcagtgggatcttgtttctgataagcaaatgatgcaggaggag 261
|| ||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 ggactagctgccccgagtcaatgggatcttgtctctgataagcaaatgatgcaggaggag 261
Query: 262 caacctcttcaagttgcaaggtgtactaaaatcattaatccaaatacggatgatgccaag 321
||||||||||||||||||||||| ||||| || |||| || || || || || ||||||
Sbjct: 262 caacctcttcaagttgcaaggtgcactaagattattagccctaacactgaggacgccaag 321
Query: 322 tatgtcataaatgtcaagcaaattgctaagtttgtggttggacttggtgacaaagtctct 381
|||||||| |||||||||||||||||||||||||| ||||| ||||| || ||||||||
Sbjct: 322 tatgtcattaatgtcaagcaaattgctaagtttgtagttgggcttggagataaagtctcc 381
Query: 382 cctactgatatagaagaaggcatgcgagtgggagttgatcgcaacaagtaccagattcag 441
||||| |||||||||||||| |||||||| || || ||||||||||| ||||||||||||
Sbjct: 382 cctacagatatagaagaagggatgcgagtaggggtcgatcgcaacaaataccagattcag 441
Query: 442 attcccttgcctccgaagattgatcccagtgttacaatgatgactgtagaagaaaagcct 501
||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 442 attccattgcctcctaagattgatccaagtgttacaatgatgactgtagaagaaaaacct 501
Query: 502 gatgtaacatataatgatgttggtggctgtaaagagcagatcgaaaagatgagagaagtc 561
||||| ||||||||||||||||| || |||||||||||||| ||||||||| |||||||
Sbjct: 502 gatgtgacatataatgatgttggcggatgtaaagagcagatagaaaagatgcgagaagtt 561
Query: 562 gtggagcttcccatgcttcatccagagaaatttgtgaaacttggaattgatcctcctaag 621
|| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 562 gttgagctccccatgcttcatccagagaaatttgtgaagcttggaattgatcctcctaaa 621
Query: 622 ggtgtcttatgctatggtcctcctggaactggcaaaactcttttggccagagctgtggcc 681
||||| || || || ||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 622 ggtgttttgtgttacggtcctcctggaactggaaaaacacttttggctagagctgtggcc 681
Query: 682 aacagaactgatgcatgttttattcgtgttattggaagtgaacttgttcaaaaatatgtt 741
|||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 682 aacagaactgatgcgtgtttcattcgtgtaattggaagtgagcttgttcaaaaatatgtt 741
Query: 742 ggtgagggtgcccgcatggttcgggaacttttccagatggcacggtcaaagaaggcctgc 801
|||||||| || |||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct: 742 ggtgagggcgctcgcatggttcgggagcttttccagatggcgcggtcaaagaaggcttgt 801
Query: 802 atagtcttttttgatgaagttgatgcaataggtggtgctcgttttgatgacggtgtgggt 861
|| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 802 attgtcttttttgatgaagttgatgcaataggtggtgcacgttttgatgatggtgtgggt 861
Query: 862 ggggataatgaggttcagcgtacaatgcttgaaattgtcaatcagcttgacggttttgat 921
|| ||||||||||| || |||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 862 ggagataatgaggtccaacgtacaatgcttgaaattgttaaccagcttgatggtttcgat 921
Query: 922 gctcgaggaaacatcaaagtcttgatggcaacgaacagacctgatacacttgatccagca 981
|| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 922 gcgcgaggaaacatcaaggtcttaatggcaacaaacagacctgatacactggatccagca 981
Query: 982 ttgttgcgtccagggagactggatcgtaaggttgagtttgggttaccggatttggagagc 1041
||||| |||||||||||||| ||||| |||||||||||||| ||||| ||| ||||||||
Sbjct: 982 ttgttacgtccagggagactcgatcgcaaggttgagtttggattacctgatctggagagc 1041
Query: 1042 agggcacagatttttaagatccatacaagaactatgaattgtgagagagatattcgtttt 1101
|||||||||||||| |||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 1042 agggcacagattttcaagatccacacgagaactatgaactgcgaaagagatattcgtttt 1101
Query: 1102 gagctccttgcacgtctttgtccaaattccactggagctgacattaggagtgtctgcact 1161
||||| ||||||||||| ||||| || ||||| ||||| |||||||||||||| ||||||
Sbjct: 1102 gagcttcttgcacgtctgtgtcctaactccacaggagccgacattaggagtgtttgcact 1161
Query: 1162 gaggctgggatgtatgccattagggcacgcaggaagacagtaactgagaaagactttctg 1221
||||||||||||||||| ||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 1162 gaggctgggatgtatgctattagggcacgtaggaagactgtgactgagaaagacttccta 1221
Query: 1222 gatgcagtaaacaaagtcatcaaggggtatcaaaagttcagtgcaacccctaagtacatg 1281
|| ||||||||||| |||||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 1222 gacgcagtaaacaaggtcatcaaaggttatcagaaattcagcgcaactcctaagtacatg 1281
Query: 1282 gtctacaatt 1291
||||| ||||
Sbjct: 1282 gtctataatt 1291
>29884.m000185 26S protease regulatory subunit, putative
Length = 1074
Score = 498 bits (251), Expect = e-140
Identities = 605/723 (83%)
Strand = Plus / Plus
Query: 571 cccatgcttcatccagagaaatttgtgaaacttggaattgatcctcctaagggtgtctta 630
|||||||||||||| || |||||||| || ||||| ||||||||||| || ||||| |
Sbjct: 352 cccatgcttcatcctgaaaaatttgtaaagcttggtattgatcctcccaaaggtgttctc 411
Query: 631 tgctatggtcctcctggaactggcaaaactcttttggccagagctgtggccaacagaact 690
||||||||||||||||||||||| ||||| ||| | |||||||||||||| || ||||||
Sbjct: 412 tgctatggtcctcctggaactggtaaaacacttctagccagagctgtggctaatagaact 471
Query: 691 gatgcatgttttattcgtgttattggaagtgaacttgttcaaaaatatgttggtgagggt 750
||||| ||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 472 gatgcttgtttcattcgagttattggaagtgagcttgttcagaaatatgttggagaggga 531
Query: 751 gcccgcatggttcgggaacttttccagatggcacggtcaaagaaggcctgcatagtcttt 810
|| | |||||||| || | || ||||||||||| ||||||||||| ||||| || |||
Sbjct: 532 gctagaatggttcgcgagttatttcagatggcacgttcaaagaaggcttgcattgtattt 591
Query: 811 tttgatgaagttgatgcaataggtggtgctcgttttgatgacggtgtgggtggggataat 870
|||||||| |||||||| ||||||||||| ||||||||||| ||||||||||| || |||
Sbjct: 592 tttgatgaggttgatgccataggtggtgcacgttttgatgatggtgtgggtggagacaat 651
Query: 871 gaggttcagcgtacaatgcttgaaattgtcaatcagcttgacggttttgatgctcgagga 930
||||| ||||||||||||||||||||||| ||||| ||||| || |||||||| || |||
Sbjct: 652 gaggtccagcgtacaatgcttgaaattgtgaatcaacttgatggatttgatgcccgtgga 711
Query: 931 aacatcaaagtcttgatggcaacgaacagacctgatacacttgatccagcattgttgcgt 990
||||| ||||| | ||||| || ||||| ||||| || ||||||||||| | ||||||
Sbjct: 712 aacattaaagttctcatggctacaaacaggcctgacactcttgatccagcgctattgcgt 771
Query: 991 ccagggagactggatcgtaaggttgagtttgggttaccggatttggagagcagggcacag 1050
|| || | | ||||| |||||||||||||| | || || ||||| ||||| |||||
Sbjct: 772 cctggacggttagatcggaaggttgagtttggtcttccagacttggaaagcagaacacag 831
Query: 1051 atttttaagatccatacaagaactatgaattgtgagagagatattcgttttgagctcctt 1110
|| |||||||||||||||||||| ||||| ||||| || ||||| || |||||||| |
Sbjct: 832 atatttaagatccatacaagaacaatgaactgtgaaagggatatccgatttgagcttttg 891
Query: 1111 gcacgtctttgtccaaattccactggagctgacattaggagtgtctgcactgaggctggg 1170
|| || ||||| || ||||| |||||||||||||| |||||||| || || || |||||
Sbjct: 892 gcccggctttgcccgaattcaactggagctgacataaggagtgtatgtacggaagctgga 951
Query: 1171 atgtatgccattagggcacgcaggaagacagtaactgagaaagactttctggatgcagta 1230
|||| ||| ||| | || || |||||||| ||||| || |||||||| ||||||||||||
Sbjct: 952 atgtttgcaattcgagcccgaaggaagactgtaacagaaaaagacttcctggatgcagta 1011
Query: 1231 aacaaagtcatcaaggggtatcaaaagttcagtgcaacccctaagtacatggtctacaat 1290
|| || || || || || || || ||||| |||||||| || || |||||||||||||||
Sbjct: 1012 aataaggtaattaaaggataccagaagtttagtgcaacaccaaaatacatggtctacaat 1071
Query: 1291 taa 1293
|||
Sbjct: 1072 taa 1074
Score = 268 bits (135), Expect = 8e-71
Identities = 276/323 (85%)
Strand = Plus / Plus
Query: 34 ataatcaaggacgagaagaatcctcgtcctcttgatgaagacgatattgccctcctcaag 93
||||||||||||||||| || |||| |||||| || ||||||||||| || || || ||
Sbjct: 22 ataatcaaggacgagaaaaaccctcctcctctggacgaagacgatatcgctcttcttaaa 81
Query: 94 acctatggtttaggtccatattcaaacagcattaagaaagaggagaaggaaatcaaggaa 153
|| || |||||||| || ||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 82 acttacggtttaggaccgtattcaactagcattaagaaagctgagaaggaaataaaggaa 141
Query: 154 ctggctaagaagatcaatgacctctgtggtatcaaggaatcggacactgggttagctgca 213
|||||||||| ||||||| | || ||||||||||| || |||||||| |||||||||
Sbjct: 142 atggctaagaaagtcaatgatatatgcggtatcaaggagtctgacactggcttagctgca 201
Query: 214 ccaagtcagtgggatcttgtttctgataagcaaatgatgcaggaggagcaacctcttcaa 273
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cccagccagtgggatcttgtttctgataagcaaatgatgcaggaggagcaacctcttcag 261
Query: 274 gttgcaaggtgtactaaaatcattaatccaaatacggatgatgccaagtatgtcataaat 333
|| |||||||| || || || || | |||||| || || |||||||| ||||| ||||||
Sbjct: 262 gtggcaaggtgcacaaagataataagtccaaacactgaagatgccaaatatgtaataaat 321
Query: 334 gtcaagcaaattgctaagtttgt 356
||||| |||||||| ||| ||||
Sbjct: 322 gtcaaacaaattgcaaaggttgt 344