Jatropha Genome Database
- JcCA0136101.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0136101.20 - phase: 2 /partial
(1321 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30032.m000458 conserved hypothetical protein 1364 0.0
30055.m001607 conserved hypothetical protein 66 6e-10
>30032.m000458 conserved hypothetical protein
Length = 2043
Score = 1364 bits (688), Expect = 0.0
Identities = 1135/1282 (88%), Gaps = 4/1282 (0%)
Strand = Plus / Plus
Query: 7 tctaaagaactacttaaaattaatcaaccgtgtgtggggaaatgaagatcggccttcatc 66
|||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 718 tctaaagaactacttaaaatta-tcaaccgtgtatggggtaatgaagatcggccgtcatc 776
Query: 67 aagcatgtctctcatctcagccctacatgctgagcttgagagagctcgattgcaagtcaa 126
||||||||||| || ||||||||||||||||||||||| | ||||||||||| |||||
Sbjct: 777 gagcatgtctcttatatcagccctacatgctgagcttgaacgggctcgattgcaggtcaa 836
Query: 127 tcatcttatccaagaacagcgctcggatcagaatgagctaaactatttaatgaagtgctt 186
||||||||| |||||||| || ||||||||||||||| |||| |||||| ||||||||||
Sbjct: 837 tcatcttattcaagaacaacgatcggatcagaatgagataaattatttattgaagtgctt 896
Query: 187 tgctgaagaaaaggcagcatggaaaaacaaggagcaaaaagtggttgcagctgctattga 246
||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 897 tgctgaagaaaaggcttcatggaaaaacaaggagcagaaagtggttgaagctgctattga 956
Query: 247 gtccattgctggggaacttgaggtagagaagaagctgaggagacggcttgaaagcttgaa 306
||||||||||| |||||||||||||||||||| ||||| || || |||| ||||||||
Sbjct: 957 atccattgctggagaacttgaggtagagaagaaactgagacgaaggtttgagagcttgaa 1016
Query: 307 caagaagcttgggaaggaactagctgagacaaagtcttctctgttgaaggcagtgaaaga 366
||||||||||||||| |||||||||||||| ||| |||||||| |||||||||| || ||
Sbjct: 1017 caagaagcttgggaaagaactagctgagactaagacttctctgatgaaggcagttaagga 1076
Query: 367 gcttgagaatgagaagagagcaagggttgtgatggagcaagtatgtgatgaactagccag 426
|||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||
Sbjct: 1077 acttgagaatgagaagagaacaagagttgtgatggagcaagtatgtgatgaattagccag 1136
Query: 427 ggatataggtgaagataaagctgaagttgaagaacttaagagagaatccgtaaaactctg 486
|||| | | ||| ||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 1137 ggatgtggatgaggataaagctgaagttgaagaactgaagagagaatcagtaaaactttg 1196
Query: 487 tgcagaggttgagaaggaaagagagatgctgcagttggctgatgtgttacgtgaggagag 546
| |||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 1197 ttcagaggttgagaaggaaagagagatgatgcagttggctgatgtattacgcgaggagag 1256
Query: 547 agtccagatgaaactttcagaagctaaataccaactcgaggagaagaatgcagctgtgga 606
|||||| ||||| ||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 1257 agtccaaatgaagctttcagaagctaaatatctgctggaggagaagaatgcagctgtgga 1316
Query: 607 caaactgaggagtcaacttgaagcttttttaggaaccaaaagaagcaaagaaaaaggtcg 666
|||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||||||
Sbjct: 1317 caaactgaggagtcaactcgaagcatttttaggacccaaaagaaccaaagaaaaaggtcg 1376
Query: 667 cagttcttatcatatgaatgatgaagatatagtagcgtatttaaataaatctcgtcctgt 726
|||| ||||||||||| |||||||| || | ||| ||||| |||||| ||||| ||||
Sbjct: 1377 tggttcctatcatatgaaggatgaagagattgcagcttatttgaataaaactcgttctgt 1436
Query: 727 ggcccatcaaaatgaagtaaatgaggatgatggaggagaagtagaagatggcttagaatg 786
||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||
Sbjct: 1437 ttcccatcagaatgaagtaaatgaggatgat---ggagaagtagaagatggggttgaatg 1493
Query: 787 tgaagatgactcgggtgaaagtgatcttcattccatagaattgaatatggacaacaataa 846
|| || || || | |||||||||||||||||||||||||||||| ||||| |||| ||
Sbjct: 1494 cgaggaagattcagctgaaagtgatcttcattccatagaattgaacatggataacatcaa 1553
Query: 847 taagagctacaaatggacttatccttctggaactcctcgtgatttgagaaaggcagcaat 906
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1554 taagagctacaaatggacttgcccttctggaactcctcgtgatttaagaaaggcagcaat 1613
Query: 907 tgatgaagaagaaaccaaagggaggaagtctacctccagcaaagtacctagaagaagtac 966
|||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 1614 tgatgaagaagaaatcaaagggaggaagtctacctccagcaaagttcctaggagaagcac 1673
Query: 967 ttctctgcaaaggagcatatcagatggagttgaatggagcgcacaaaatgagaggctctc 1026
|||||||| || ||||||||||||||||| || |||| || |||||||||||||| ||
Sbjct: 1674 gtctctgcagagaagcatatcagatggagtggactggaatgcccaaaatgagaggctgtc 1733
Query: 1027 agttacaggagatgggatagactggggaggattatctgaacttgaaaggcatttgcaagg 1086
||||||||||||||||||||| |||| ||||| | |||||||| ||||||||||||||
Sbjct: 1734 agttacaggagatgggatagattgggagggattcacagaacttgagaggcatttgcaagg 1793
Query: 1087 aaaaggttacggagatgaaatgcttgggcatcaatcagttaaaggtctcagggactattt 1146
||||||||| | ||| || |||| ||| |||| ||||| || |||||||| ||||| ||
Sbjct: 1794 aaaaggttatgtagacgatatgcatggatatcagtcagtgaagggtctcagagactactt 1853
Query: 1147 gttgtctggttctagagtagattctgcaagaggatatgctagtcctacacggcaagtggg 1206
||| ||||||||||| ||||||| | ||||| | ||||||||| ||||||||||| ||
Sbjct: 1854 gttatctggttctaggatagattccactagaggttgtgctagtccaacacggcaagtagg 1913
Query: 1207 gcagcggccttcccgagattccaacaatgcaattcaagatagacctccaacagcgccagg 1266
|||||| ||||| |||||| ||| ||||||| |||||| ||||| || |||| ||||||
Sbjct: 1914 gcagcgaccttctcgagatcccagcaatgcagctcaagagagaccgcctacagtgccagg 1973
Query: 1267 gaatgcttcaaaatcaaggcta 1288
||||||||||| |||||||||
Sbjct: 1974 aaatgcttcaaagtcaaggcta 1995
>30055.m001607 conserved hypothetical protein
Length = 1812
Score = 65.9 bits (33), Expect = 6e-10
Identities = 138/173 (79%)
Strand = Plus / Plus
Query: 302 ttgaacaagaagcttgggaaggaactagctgagacaaagtcttctctgttgaaggcagtg 361
||||| |||||||||||| |||| ||||||| |||||| | ||||| | | ||| ||
Sbjct: 901 ttgaataagaagcttgggttggaattagctgatacaaaggcatctctatcccaagcattg 960
Query: 362 aaagagcttgagaatgagaagagagcaagggttgtgatggagcaagtatgtgatgaacta 421
||||||||||||| ||||||||| |||| || | |||||||||| |||||||| ||
Sbjct: 961 aaagagcttgagagtgagaagagggcaaaggagatattggagcaagtctgtgatgagtta 1020
Query: 422 gccagggatataggtgaagataaagctgaagttgaagaacttaagagagaatc 474
|| || | ||| || |||||| |||||| ||||||||| | || ||||||||
Sbjct: 1021 gctagaggtatcggacaagatagagctgaggttgaagaattgaaaagagaatc 1073
Score = 54.0 bits (27), Expect = 2e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 806 agtgatcttcattccatagaattgaatatggacaacaataataagagctacaaatggact 865
||||||||||| ||||| ||||| || |||||||| || | |||||||||||||||| |
Sbjct: 1420 agtgatcttcactccattgaattaaacatggacaataacagcaagagctacaaatggagt 1479
Query: 866 tat 868
|||
Sbjct: 1480 tat 1482