Jatropha Genome Database

JcCA0135781.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0135781.10 - phase: 0 /partial
         (783 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009096 asparagine synthetase, putative                         283   8e-76

>30174.m009096 asparagine synthetase, putative
          Length = 1770

 Score =  283 bits (143), Expect = 8e-76
 Identities = 541/674 (80%), Gaps = 6/674 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gatagttcaaaaaccttgtggtttggtagggatgcatttggtaggcggagtcttcttgtt 60
            ||||||||||||||||| ||||||||||| |||||  ||||||||||||| || ||||||
Sbjct: 526  gatagttcaaaaaccttatggtttggtagagatgcgcttggtaggcggagcctacttgtt 585

                                                                        
Query: 61   cattggccaaccgtgaaggatcctcagtttatgctatcttctgtctcaccattttctgct 120
            ||||||||||| |||||||  || |  ||| |||| |||||||| || |||||||||  |
Sbjct: 586  cattggccaactgtgaaggtcccgcgatttctgctgtcttctgtatcgccattttcttat 645

                                                                        
Query: 121  gttgatcagagttctggtgctgatcttggagtcgaagattgtactgagcctaatttttgg 180
            ||||||   |||| ||      |||| | ||| |||||  | ||  | || ||||| |||
Sbjct: 646  gttgatggaagttatg------atctagaagttgaagagagcaccaaacccaatttctgg 699

                                                                        
Query: 181  gaggagctttcatgtgggatatacagtttatctatggctgcttcgaaactacatggatgt 240
            ||||||||| | |||||| |||| ||||||||  | ||  |||||| | |  |||| |||
Sbjct: 700  gaggagcttccttgtggggtatatagtttatcagtagccacttcgacagtgaatgggtgt 759

                                                                        
Query: 241  acttttggggaagttaaaagacatgaatgggctaatactgctctaataaacctgattaaa 300
              |  ||| ||||| |||| |||||||||||||| ||   | ||||   | || ||||| 
Sbjct: 760  cttgctggtgaagtcaaaaaacatgaatgggctagtagcacactaacggaactaattaag 819

                                                                        
Query: 301  tgggaaagagtttcagttgaaccaaaaccagaagaattgtctttttcatgtggacttgat 360
            ||||| |||||||| |||||||| |||||| |||| ||   |||||||||||| | ||||
Sbjct: 820  tgggagagagtttctgttgaacctaaaccacaagacttaaatttttcatgtgggcctgat 879

                                                                        
Query: 361  caaacatccttctcattgcctgctcggaatgtgttaagtgctttaaagaaatctgtgatg 420
            ||||| ||  | | | |||| |||| |||||||||| ||||| |||  ||||| || |||
Sbjct: 880  caaacctcaattttagtgccagctcagaatgtgttaggtgctctaagaaaatcagtaatg 939

                                                                        
Query: 421  ctgcgcacatcactccatacaatttttaaggcaggaacatctgatggtggacaagaggaa 480
            || || |||||| | ||| |||||||| ||||||||||||||||| | ||| ||||||||
Sbjct: 940  cttcgaacatcattgcatgcaatttttcaggcaggaacatctgatagcggaaaagaggaa 999

                                                                        
Query: 481  cttgttccagtggcagtcctattttctggcggattggactctatgatacttgcagcattg 540
            |  |||||||| |||||||| |||||||| |||||||| |||||||| ||||||||||| 
Sbjct: 1000 caagttccagtagcagtcctgttttctggtggattggattctatgatccttgcagcatta 1059

                                                                        
Query: 541  ttggatcagtgcctagatcccagctatggaattgatttacttaatgttagctttgatggt 600
            |||||  ||||||| |||||||||| ||||||||| || |||||||| ||||||||||| 
Sbjct: 1060 ttggacgagtgcctggatcccagctttggaattgacttgcttaatgtgagctttgatggg 1119

                                                                        
Query: 601  caatttgctcctgacagaatctctgctaaggcaggagtagaggagcttagcagaattgca 660
             | ||||||||||| ||||||||||   | |||||||||||||| ||  | |||||||| 
Sbjct: 1120 gagtttgctcctgatagaatctctggccaagcaggagtagaggaactccgaagaattgcg 1179

                          
Query: 661  ccattgagaaggtg 674
            ||| ||||||||||
Sbjct: 1180 ccaatgagaaggtg 1193