Jatropha Genome Database

JcCA0135211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0135211.10 + phase: 2 /partial
         (184 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29785.m000940 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase,...   159   7e-39

>29785.m000940 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase,
            putative
          Length = 1167

 Score =  159 bits (80), Expect = 7e-39
 Identities = 131/148 (88%)
 Strand = Plus / Plus

                                                                        
Query: 5    agtaccattgtcgggattggttcgccagatcctccacaatttatatatgatgatgaagac 64
            |||||||| || |||||||||||||| ||||||||||| ||||| ||||| || || |||
Sbjct: 985  agtaccatagttgggattggttcgccggatcctccacagtttatttatgacgacgatgac 1044

                                                                        
Query: 65   tacaaggatgttttcatctcagaggcaaacttcttgactcgtgaaccaaaccagtggtat 124
            ||||||||||||||| | |||||||| |||||||||||||||||| ||||  ||||||| 
Sbjct: 1045 tacaaggatgttttcgtgtcagaggctaacttcttgactcgtgaagcaaatgagtggtac 1104

                                        
Query: 125  aaggaacctgcttcaactgctgcatgtg 152
            || |||||||||||||||||||| ||||
Sbjct: 1105 aaagaacctgcttcaactgctgcttgtg 1132