Jatropha Genome Database

JcCA0134311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0134311.10 + phase: 2 /partial
         (247 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004707 conserved hypothetical protein                          151   2e-36

>29929.m004707 conserved hypothetical protein
          Length = 1452

 Score =  151 bits (76), Expect = 2e-36
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                        
Query: 8    ggttgtcagcagaaagaacattccactcagccatgcagggcttgcactctttgtatagct 67
            ||||||||||| || ||||||||| ||||| |||||||||  ||||| ||||||||||||
Sbjct: 1207 ggttgtcagcaaaaggaacattcctctcaggcatgcaggggatgcacgctttgtatagct 1266

                                                                        
Query: 68   agatgtgttcagtgtgggcggtgtattaatgacagtgaatatgaggagacattctgcctt 127
             | |||  |||||||||  | |||||||||||||||||||||||||| ||||||||||| 
Sbjct: 1267 cggtgttctcagtgtggctgttgtattaatgacagtgaatatgaggaaacattctgcctc 1326

                                
Query: 128  gagttgctttgttcagattg 147
            ||||||||||||||||||||
Sbjct: 1327 gagttgctttgttcagattg 1346