Jatropha Genome Database
- JcCA0132221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0132221.10 + phase: 0 /partial
(1262 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28076.m000417 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... 716 0.0
>28076.m000417 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
putative
Length = 2151
Score = 716 bits (361), Expect = 0.0
Identities = 617/701 (88%), Gaps = 6/701 (0%)
Strand = Plus / Plus
Query: 73 agcatggattttgtgcgagtttgtgatttgaagaggatcaagtctggt---aggaagaag 129
||||||||||||||| || |||||||||||||||| |||||||||||| || ||||
Sbjct: 73 agcatggattttgtgagaatttgtgatttgaagagaatcaagtctggtggtagaaagaga 132
Query: 130 atttcaatgattaggaactcga---atcctggtcctgaaatggttgaactgcagcctgct 186
||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 133 atttcgatgattaggaactcgagtaatcctggtcctgaaatggttgaacttcaacctgct 192
Query: 187 tcagaagggagtcctttgttagttcctagacagaagtattgtgagtctgtacacaagact 246
|| ||| || ||| ||||||| || |||||||||||||| ||||| |||||||||
Sbjct: 193 tctccaggaagccctctgttagtgcccagacagaagtattgcgagtcaactcacaagact 252
Query: 247 gtcaggaggaaaacacgaactgtaatggtgggaaatgtagctcttggtagtgatcatcct 306
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 253 gtgaggagaaaaacacgaacggtaatggttggaaatgtggctcttggtagtgatcatcct 312
Query: 307 atcagagttcagactatgactacatccgacactaaagacgttgctggaacagttgaacag 366
|| | ||||| |||||||||||| ||| || || | ||||||| ||| || ||| ||
Sbjct: 313 attcgggttcaaactatgactacaagcgataccaagaatgttgctgcaactgtcgaagag 372
Query: 367 gttatgagaatagcagaccagggagcaaatttagttcggattacagttcaagggaagaga 426
|| ||||||||||||||| |||| ||| |||| ||| |||| ||||||||||| ||||||
Sbjct: 373 gtgatgagaatagcagacaagggggcagatttggttaggataacagttcaaggaaagaga 432
Query: 427 gaagcagatgctgccttcgaaataaaaaatactcttgtgcagaaaaattacaatatacct 486
||||| |||||| ||| || ||||||||| | |||||||||||||||||||||||||||
Sbjct: 433 gaagcggatgcttgctttgacataaaaaattcacttgtgcagaaaaattacaatatacct 492
Query: 487 ctggttgcagatattcattttgcaccaactgttgcactgcgagtagctgaatgctttgac 546
||||||||||||||||||||||| ||| | |||||| |||| |||||||||||||||||
Sbjct: 493 ctggttgcagatattcattttgctccatcagttgcattgcgtatagctgaatgctttgac 552
Query: 547 aagattcgtgtaaatcctggaaattttgctgataggcgggctcagtttgagaagctagag 606
|| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 553 aaaattcgtgtaaatccgggaaatttcgctgataggcgggctcagtttgagaagcttgaa 612
Query: 607 tacacagatgaggactatcagaaagagctcgagcacattgagcaggtttttactccattg 666
|||||||| || || ||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 613 tacacagaggatgattatcagatagagcttgagcatattgagcaggtttttactccattg 672
Query: 667 gttgagaaatgtaagaagtatggaagggcaatgcgcattgggacaaaccatggaagcctt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 673 gttgagaaatgtaagaagtatggaagggcaatgcgcattgggacaaaccatgggagtctt 732
Query: 727 tcagatcgcataatgagctactatggagattctcctagggg 767
|||||||| || |||||||||||||||||||||||||||||
Sbjct: 733 tcagatcgtattatgagctactatggagattctcctagggg 773
Score = 636 bits (321), Expect = 0.0
Identities = 444/485 (91%)
Strand = Plus / Plus
Query: 772 gcaagcaaccctgtcatcatggtccaggcataccgtttgctcgtagcagaaatgtatgtt 831
||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 850 gcaagcaacccggtcatcatggtccaggcatatcgtctgcttgtagcagaaatgtatgtt 909
Query: 832 cagggctgggattatccattacacttgggtgtcactgaagctggagaaggtgaagatggg 891
||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 910 cagggatgggactatccactgcacttgggtgtcactgaagctggagaaggtgaagatggg 969
Query: 892 cgtatgaagtctgcaattggtattgggacacttcttcaggatggtttgggggatacaatc 951
|| ||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 970 cgcatgaaatctgcaattggcattgggactcttcttcaggatggtttgggtgatacaatc 1029
Query: 952 agggtgtcacttacagagccaccagagaaagagatagacccttgcagaaggttggccaac 1011
||||| ||||||||||| ||||||||||| |||||||| ||||| |||| ||||| |||
Sbjct: 1030 agggtctcacttacagaaccaccagagaaggagatagatccttgtcgaagattggcaaac 1089
Query: 1012 cttggtatgagagcatctgcaatccaacaaggagtggcaccatttgaagaaaaacatagg 1071
|||||||||||||| |||||| | ||||||||||||||||||||||||||||| || ||
Sbjct: 1090 cttggtatgagagcgtctgcagtacaacaaggagtggcaccatttgaagaaaagcacaga 1149
Query: 1072 cattattttgatttccagcgccgatctggtcaattgccagtacaaaaggagggtgaggag 1131
|||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 1150 cattattttgattttcagcgcagatctggtcaattgccagttcaaaaggagggtgaagag 1209
Query: 1132 gtggattatagaggtgtcctgcaccgtgatggctctgttcttatgtcagtttccttggat 1191
|| ||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 1210 gtagattatagaggtgccctgcaccgtgatggctctgttctcatgtcagtttcactagat 1269
Query: 1192 cagttaaaggctcctgaactcctatacaagtcacttgcagcaaagcttgttgttggaatg 1251
|||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1270 cagttaaaggtacctgaactcctatacaagtcactagcagcaaagctcgttgttggaatg 1329
Query: 1252 ccttt 1256
|||||
Sbjct: 1330 ccttt 1334