Jatropha Genome Database
- JcCA0132071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0132071.10 + phase: 0
(1140 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29866.m000609 starch synthase, putative 759 0.0
30068.m002598 starch synthase, putative 119 4e-26
>29866.m000609 starch synthase, putative
Length = 1875
Score = 759 bits (383), Expect = 0.0
Identities = 822/970 (84%), Gaps = 3/970 (0%)
Strand = Plus / Plus
Query: 16 gccaatgggcaccgtgtcatgacaatctcaccacgctacgatcagtacaaagattcctgg 75
||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||| | |||
Sbjct: 331 gccaatgggcaccgtgtcatgaccatctcaccacgatacgaccagtacaaggatgcttgg 390
Query: 76 gacacaaatgttgttattcagatagaagttgggggtaagcttgaaactgttcgcttcttc 135
|| ||||| ||||| ||||| | ||||||||| || | ||||||||||||| ||||
Sbjct: 391 gatacaaactttgttgttcaggtgaaagttggggatagaatcgaaactgttcgctacttc 450
Query: 136 cattgct---acaaacgaggagttgatcgtgtttttgtggatcacccaatgtttctagag 192
|| |||| ||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 451 cactgctgctacaaacgaggagttgatcgtgtttttgtggatcacccaatgttcctggag 510
Query: 193 aaggtatggggaaaaactggttcgaaactctatggtcctcaggcaggaacagattatgaa 252
||| ||||||| |||||||| || |||||||||||||| |||||||| |||||||||
Sbjct: 511 aagatatgggggaaaactgggtcaaaactctatggtccccaggcaggggatgattatgaa 570
Query: 253 aataaccaacttcgtttcagtttgttttgccaggcagctattgaagcaccgcggttgtta 312
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 571 gataaccaacttcgtttcagcttgttttgccaggcagctatagaagcaccgcggttgtta 630
Query: 313 agtctcaacagtggtaaatacttctcaggaccctatggtgaggatgttgtcttcatcgca 372
|||||||| | | | |||||||| |||||||| ||||||||||||||| ||||||| ||
Sbjct: 631 agtctcaatactagcaaatacttttcaggaccatatggtgaggatgttatcttcattgct 690
Query: 373 aatgattggcacactgctcttcttccctgctacctaaaagccttttacaaatcaaagggg 432
||||||||||||||||||||| |||| ||||| || ||| ||||||| | | |||
Sbjct: 691 aatgattggcacactgctcttgttccttgctatctgaaaagtatttacaaggctagaggg 750
Query: 433 atgtatagaaatgccaaggtggttttctgcatccacaatattgcataccaaggacgattt 492
|| |||| ||| |||||||| | ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 751 atctataaaaacgccaaggtagctttctgcattcacaacattgcctaccaagggagattt 810
Query: 493 gccttttcggattttgcacttcttaatcttccagaacggtttaagaactcattcgannnn 552
|| || | |||||| ||||||| ||||||||||| | ||| |||| || || ||
Sbjct: 811 gcaattgcagatttttcacttctaaatcttccagaccagttcaagagatcttttgatttt 870
Query: 553 nnngatggatatgaaaaacctgtgaaaggaaggaagattaattggatgaaagccggaata 612
||||||||||| |||||||||||||||||||||||||| |||||||| || || |||
Sbjct: 871 attgatggatatgacaaacctgtgaaaggaaggaagattaactggatgaaggctggcata 930
Query: 613 ttagaatcagacaggattgtaacagttagtccacattatgcagaggaactagtttctggt 672
| ||||||||||||| ||||||| || || ||| | ||||| |||||||| || || ||
Sbjct: 931 tcagaatcagacagggttgtaactgtgagcccatactatgctgaggaacttgtatccggc 990
Query: 673 atagagaaaggtgttgaattagataacatccttcgtatgaccggtatttctggaattgtg 732
| ||||||||||| |||||||| ||||| ||||| ||||| || || ||||||||
Sbjct: 991 gtggagaaaggtgtggaattagagaacatacttcggatgactggaatcatcggaattgta 1050
Query: 733 aacggtatggatgttcaggagtggaatccatccactgacaaatatatcaatgttaaatat 792
|| || |||||||| || |||||||||||||| || |||||||| |||||||| |||| |
Sbjct: 1051 aatggcatggatgtgcaagagtggaatccatctacagacaaatacatcaatgtcaaattt 1110
Query: 793 gattctgcgactgtgatggaagcgaagcctcttttaaaggaagcactacaagcagaagtt 852
||| || | ||||||| ||| || ||||||||||| |||||||| || ||||| ||||||
Sbjct: 1111 gatgctaccactgtgacggatgcaaagcctcttttgaaggaagccctgcaagccgaagtt 1170
Query: 853 gggttgcctattgatagaaatatccctgtgataggcttcattggtagactcgaagagcaa 912
||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1171 gggttgcctgttgataggaatatccctgtaataggcttcattggtagacttgaagagcag 1230
Query: 913 aaaggttcagacattctcgcagcagcaattccattcttaattcaagagaatgtccaaata 972
||||||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 1231 aaaggttcagacattcttgcagcagccattccatactttattcaagagaatgtccaaata 1290
Query: 973 attattcttg 982
||||| ||||
Sbjct: 1291 attatccttg 1300
>30068.m002598 starch synthase, putative
Length = 1581
Score = 119 bits (60), Expect = 4e-26
Identities = 273/344 (79%)
Strand = Plus / Plus
Query: 580 ggaaggaagattaattggatgaaagccggaatattagaatcagacaggattgtaacagtt 639
|||||||| || ||||||||||| || ||| | || |||||||||||| || | || ||
Sbjct: 727 ggaaggaaaatcaattggatgaaggctggagttttggaatcagacagggttttgactgtg 786
Query: 640 agtccacattatgcagaggaactagtttctggtatagagaaaggtgttgaattagataac 699
|||||| | |||||||||||| | ||||||| | || | |||||| || | ||||||
Sbjct: 787 agtccatactatgcagaggaagttatttctggagtggaaagaggtgtggagctggataac 846
Query: 700 atccttcgtatgaccggtatttctggaattgtgaacggtatggatgttcaggagtggaat 759
||| | |||| || |||||||||||||| | |||||||||||||| ||||||||||||
Sbjct: 847 atcatccgtaaaactggtatttctggaatcataaacggtatggatgtccaggagtggaat 906
Query: 760 ccatccactgacaaatatatcaatgttaaatatgattctgcgactgtgatggaagcgaag 819
|| | || || ||||| || | | || || ||| | | ||||| | ||||| |||
Sbjct: 907 cctgctacagataaatacattggtatcaactacgatgccacaactgttacagaagcaaag 966
Query: 820 cctcttttaaaggaagcactacaagcagaagttgggttgcctattgatagaaatatccct 879
||| | || |||||||| || ||||||||||||||||||||| ||||||| || || |||
Sbjct: 967 cctttattgaaggaagcccttcaagcagaagttgggttgcctgttgataggaacattcct 1026
Query: 880 gtgataggcttcattggtagactcgaagagcaaaaaggttcaga 923
| ||||| |||||||||||| | |||||||| |||||||||||
Sbjct: 1027 ttaataggattcattggtagattagaagagcagaaaggttcaga 1070
Score = 111 bits (56), Expect = 9e-24
Identities = 98/112 (87%)
Strand = Plus / Plus
Query: 116 ttgaaactgttcgcttcttccattgctacaaacgaggagttgatcgtgtttttgtggatc 175
|||||||| ||||||||||||| |||||||| |||||||||||||||| || || ||||
Sbjct: 428 ttgaaactattcgcttcttccactgctacaagagaggagttgatcgtgtcttcgtcgatc 487
Query: 176 acccaatgtttctagagaaggtatggggaaaaactggttcgaaactctatgg 227
|||||||||| || |||||||| ||||| |||||||| || ||| |||||||
Sbjct: 488 acccaatgttccttgagaaggtgtggggcaaaactggatctaaaatctatgg 539