Jatropha Genome Database
- JcCA0131991.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0131991.20 + phase: 0 /pseudo/partial
(978 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006368 conserved hypothetical protein 287 6e-77
29822.m003381 conserved hypothetical protein 123 2e-27
27469.m000170 conserved hypothetical protein 56 4e-07
>30169.m006368 conserved hypothetical protein
Length = 1083
Score = 287 bits (145), Expect = 6e-77
Identities = 540/671 (80%), Gaps = 3/671 (0%)
Strand = Plus / Plus
Query: 308 aggagagagtgattaatgggacaaattcaggtacctttgatttgcatttagacaagattg 367
||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 407 aggagagagtgatcaatgggacaaattcaggtacttttgacttgcacctagacaagattg 466
Query: 368 acaggaattggacaagtaaacttcctgaattggactatgcaataatatcagatatgcatt 427
||||||||||||||||||||||||||||| |||||||||| || || ||||| | ||||
Sbjct: 467 acaggaattggacaagtaaacttcctgaaatggactatgcgatcatctcagacgtacatt 526
Query: 428 ggttttacaggaagaatttcttatatgacaatggaaatattataggatgcatattttgtg 487
|||| | ||||| || || ||||||| ||||| ||| | ||||||||||||| |||
Sbjct: 527 ggttctttaggaaaaactttctatatgaaaatgggaatttgataggatgcatatattgca 586
Query: 488 acgaaccgaatatcaaaaactataatattgaatttgcccttcaaagaataataagacttg 547
||| || || | || | ||||||| |||| ||||| || | || ||| | |||||||
Sbjct: 587 gcgagccaaacctgaagagctataatcttgagtttgcgattgagaggatagtgagacttg 646
Query: 548 tgctaaactacattaataattgcaaagaatgcaa---agacatagtcaccttcttaagga 604
| || | ||| | | || ||||| ||||| || || || | || || ||||||
Sbjct: 647 tacttacttacgtcagcaactgcaaggaatgtaaggcagggttattgacattgataagga 706
Query: 605 catactcacctgcacattttgagaatgggtcctggaacacaggaggaaactgtaacagaa 664
|||||||||| |||||||| ||||||||||| ||||||||||||||||| || |||| |
Sbjct: 707 catactcaccagcacatttcgagaatgggtcgtggaacacaggaggaaattgcaacaaga 766
Query: 665 ctaaacctttagatgaaggagagtttaacctggaaagttcagattggaagcttcgaagca 724
| || | |||| ||| | ||| ||||||||||||||||||||||| |||||
Sbjct: 767 cagcgcccctccgagaagaggagatcaacttggaaagttcagattggaagcttagaagcg 826
Query: 725 ttcaagtagaagagatagagaaggcaaggaaagtagagaaaaaagggaaaagatttgaag 784
||||||||| |||| |||| |||||||| |||| ||| || | ||| ||||||||||| |
Sbjct: 827 ttcaagtaggagaggtagaaaaggcaagaaaagcagaaaagagaggaaaaagatttgagg 886
Query: 785 ttttggatataaccaaggctatgttaatgagacctgatggtcatcctgattcttactggg 844
|||| ||| | |||| ||||||||||||||||| ||||| ||||||||| |||| ||||
Sbjct: 887 tttttgatgtcaccatggctatgttaatgagacacgatggacatcctgatgcttattggg 946
Query: 845 ataatcaatggatgaaaggttacaatgactgtgttcattggtgcttgccaggtcctattg 904
||| ||||||||||||| || | |||||||| || |||||| ||||||| || ||||
Sbjct: 947 gtaacaaatggatgaaaggatatagcgactgtgtacactggtgcatgccaggcccgattg 1006
Query: 905 atgtgtggaatgatttattgatggctttgcttaaaagatatgctgatttctctaaactaa 964
|||| ||||||||||| |||||||| |||||||| |||||| |||| ||| | ||| |
Sbjct: 1007 atgtatggaatgatttgttgatggcattgcttaagagatatatagattcctccagactta 1066
Query: 965 aggagataaat 975
|||||||||||
Sbjct: 1067 aggagataaat 1077
Score = 145 bits (73), Expect = 6e-34
Identities = 223/274 (81%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 14 aaaattgtgacttattcagcggccattggattcctgacctgagaggttctcaatacacga 73
||||||||||||| || | || |||||| | ||||| |||||| | ||||| || || |
Sbjct: 14 aaaattgtgacttgtttaagggtcattgggtccctgatctgagaaggtctcagtatacaa 73
Query: 74 atgtgagctgcccatcaatccctgactcaaaagattgtttcaaacatggaagacaagata 133
||||||||||| || || |||||||| || |||||||||| |||||||| |||| |
Sbjct: 74 atgtgagctgcaagtcgattcctgactcgaagaattgtttcaagcatggaaggaaagaca 133
Query: 134 cagatttttgaa-ctggagatggaaacctgatgcttgtgaacttgcaagattcgatccca 192
||||||||| || |||||||||||||||||||| ||||| ||| | |||||||||||||
Sbjct: 134 cagattttttaaactggagatggaaacctgatggctgtgagcttccgagattcgatccca 193
Query: 193 ggannnnnnncgcccttgttcgaggaaagacaatggcatttgtaggagactcggttgctc 252
||| ||| |||||||||||||||||||||| ||| ||||||| || |||||||
Sbjct: 194 ggatttttttcgcaattgttcgaggaaagacaatggcttttataggagattcagttgctc 253
Query: 253 gaaaccatgcagaatcacttctgtgtcttttgtc 286
| ||||||| ||||| ||||| ||||| |||||
Sbjct: 254 ggaaccatgtggaatcgcttctatgtctcttgtc 287
>29822.m003381 conserved hypothetical protein
Length = 1257
Score = 123 bits (62), Expect = 2e-27
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 767 aagggaaaagatttgaagttttggatataaccaaggctatgttaatgagacctgatggtc 826
||||||| |||||| | | ||| ||||| |||| ||||||| | |||||||||||||| |
Sbjct: 1073 aagggaagagatttaaggctttagatatcaccagggctatgcttatgagacctgatgggc 1132
Query: 827 atcctgattcttactgggataatcaatggatgaaaggttacaatgactgtgttcattggt 886
|||||| ||||||||| || |||||||||| ||||||||||| ||||| |||||||
Sbjct: 1133 atcctggcgcttactggggcaacaaatggatgaagggttacaatgattgtgtccattggt 1192
Query: 887 gcttgccaggtcctattgatgtgtggaatgattt 920
||||||||||||| || ||| |||||||||||||
Sbjct: 1193 gcttgccaggtccaatcgatttgtggaatgattt 1226
>27469.m000170 conserved hypothetical protein
Length = 990
Score = 56.0 bits (28), Expect = 4e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 870 tgactgtgttcattggtgcttgccaggtcctattga 905
||||||||||||||||||||||||||| || |||||
Sbjct: 873 tgactgtgttcattggtgcttgccaggccccattga 908