Jatropha Genome Database
- JcCA0130881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0130881.10 - phase: 0
(1008 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014310 Rop guanine nucleotide exchange factor, putative 408 e-113
29683.m000479 Rop guanine nucleotide exchange factor, putative 98 1e-19
>30170.m014310 Rop guanine nucleotide exchange factor, putative
Length = 1572
Score = 408 bits (206), Expect = e-113
Identities = 527/634 (83%)
Strand = Plus / Plus
Query: 292 tctgaggttgaaatgatgaaagagcgatttgctaagcttctgcttggagaagacatgtca 351
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 253 tctgatgttgaaatgatgaaggagcgatttgctaagcttctgcttggcgaagacatgtca 312
Query: 352 ggtagaggcaatggagtttgcacagctctagccatctccaatgccattacaaatttatct 411
|| |||| || || ||||| |||||||| |||||||||||||||||||| ||||| |||
Sbjct: 313 ggcggaggaaagggcgtttgtacagctctcgccatctccaatgccattaccaatttgtct 372
Query: 412 gcttctgtttttggggagcagtggaagttagagccactagcacaaccgaaaaagtccatg 471
|||||||| |||||||||| ||||||||||||||||||||| | |||||||| |||
Sbjct: 373 gcttctgtctttggggagctacggaagttagagccactagcacctcaaaaaaagtcaatg 432
Query: 472 tggcaccgtgagatggaatggcttctgtgtgtcagtaattccatagtggagcttgttccg 531
||||||||||||||||| | |||| | || || ||| |||| ||||| |||||||||||
Sbjct: 433 tggcaccgtgagatggatttgcttttatgcgtgagtgattctatagtagagcttgttcct 492
Query: 532 tcaatgcaagatttcccaagtggtgcaacctttgaggttatggtgcctcggcctcgctca 591
||||||||| || ||||| |||||| |||||||||||||||||||| || ||||||| |
Sbjct: 493 tcaatgcaaaatctcccaggtggtgggacctttgaggttatggtgccccgacctcgctta 552
Query: 592 gatctacatgtaaaccttccagcactcaagaagcttgatgccatgttgcttagcattctt 651
|| || | | |||||||||||||| |||||||| || ||||| |||||||||||||
Sbjct: 553 gacctttttatgaaccttccagcactgaagaagctggagaccatgctgcttagcattcta 612
Query: 652 gatgggttttgcaattcagatttcagttatgttgatagcaaggtaatggttgctgttggc 711
|| ||||||||| || | || || ||||||||| | ||| || ||||||| |||
Sbjct: 613 gacgggttttgcgatgctgagttttactatgttgatcgtggggtcattgttgctggtggt 672
Query: 712 gatgaaacaaaatcatttcctttattttcatcttcttcaagacttccaattaatcaggaa 771
|||| || || ||||| |||||| |||||||||| |||||| | |||| || |||
Sbjct: 673 aatgagactgaaacattttctttatcttcatcttctgcaagaccctctattagtcgtgaa 732
Query: 772 gagaagtgctggcttccctttcccaaggttccccggaatggtttatctgaagatacaaga 831
|||||||| |||||||| ||||| || || || | ||||||||| ||||||||| |||||
Sbjct: 733 gagaagtggtggcttccatttcctaaagtacctcagaatggtttgtctgaagatgcaaga 792
Query: 832 aagagattacagcaatgtagggaatgcacaaatcaaatacttaaggctgccatggcaatt 891
|| ||| | || || |||| ||||||||||||||| || || || | |||||||||||||
Sbjct: 793 aaaagactgcaacagtgtaaggaatgcacaaatcagatcctcaaagttgccatggcaatt 852
Query: 892 aataacagtgtgttgagtgagatggaaattccaa 925
||| ||||||||||| ||||||||| |||||||
Sbjct: 853 aatggcagtgtgttgactgagatggagattccaa 886
Score = 77.8 bits (39), Expect = 1e-13
Identities = 123/151 (81%)
Strand = Plus / Plus
Query: 1 atggagactgtttcgtcagaggaagagcttgatcaattgagcgagcgatgtgaatttgac 60
|||| |||| ||||||||||||| || | |||||| | || ||| | | ||| |||||
Sbjct: 1 atggggactatttcgtcagaggaggaattggatcaacttagggagaggtttgagtttgat 60
Query: 61 agctacagtttaagtgctgatgtcagtgaatcggagagttcgagtagcttctcctgcccg 120
||||||| || ||||||||| || ||||||||| ||||||| ||||||||||| || |
Sbjct: 61 agctacacttcaagtgctgacgtgagtgaatcgaagagttcaagtagcttctcttgtcac 120
Query: 121 cattacgatcaccaaggcgcttccacttctt 151
||||| || || ||| |||||||||||||||
Sbjct: 121 cattatgagcatcaacgcgcttccacttctt 151
>29683.m000479 Rop guanine nucleotide exchange factor, putative
Length = 1743
Score = 97.6 bits (49), Expect = 1e-19
Identities = 205/257 (79%)
Strand = Plus / Plus
Query: 274 aaaccggatactggtttgtctgaggttgaaatgatgaaagagcgatttgctaagcttctg 333
|||| ||| |||| ||| ||||| || ||||||||||||||| ||||||||||||| ||
Sbjct: 277 aaacgggacactgatttatctgaagtggaaatgatgaaagagagatttgctaagctactt 336
Query: 334 cttggagaagacatgtcaggtagaggcaatggagtttgcacagctctagccatctccaat 393
|| ||||| |||||||| || | || || ||||| || || ||||| || |||||||||
Sbjct: 337 ctaggagaggacatgtctggaggtggtaaaggagtctgtactgctcttgcaatctccaat 396
Query: 394 gccattacaaatttatctgcttctgtttttggggagcagtggaagttagagccactagca 453
||||| || ||| | |||||| |||| ||||| || | |||| |||||||||| ||||
Sbjct: 397 gccatcactaatctctctgctactgtatttggtgaactatggaggttagagccattagct 456
Query: 454 caaccgaaaaagtccatgtggcaccgtgagatggaatggcttctgtgtgtcagtaattcc 513
| || || ||||||||||||| | || ||||||||| | | ||||||||| ||||
Sbjct: 457 ccacaaaagaagtccatgtggcggagagaaatggaatggttattatgtgtcagtgattca 516
Query: 514 atagtggagcttgttcc 530
|| || |||||||||||
Sbjct: 517 attgttgagcttgttcc 533
Score = 52.0 bits (26), Expect = 7e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 808 aatggtttatctgaagatacaagaaagagattacagcaatgtagggaatgcacaaatcaa 867
||||| |||||||| ||| ||||||||||| | ||||| || ||||| || ||||| ||
Sbjct: 811 aatgggttatctgaggatgcaagaaagagactgcagcagtgcagggactgtacaaaccag 870
Query: 868 atacttaaggctgccatggcaattaa 893
||| | ||||| || |||||||||||
Sbjct: 871 atattgaaggcagctatggcaattaa 896