Jatropha Genome Database

JcCA0128511.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0128511.20 - phase: 0 /partial
         (696 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29660.m000782 palmitoyl-acyl carrier protein thioesterase             369   e-101

>29660.m000782 palmitoyl-acyl carrier protein thioesterase
          Length = 1194

 Score =  369 bits (186), Expect = e-101
 Identities = 390/458 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagaggtggtggagatagatacatgggtaggagcatcaggaaagaatggaatgagaaga 60
           |||||||| ||||| || || ||||||||| ||||||||||||||||||||||||  |||
Sbjct: 517 ggagaggtagtggaaatcgacacatgggtacgagcatcaggaaagaatggaatgaagaga 576

                                                                       
Query: 61  gactggcttgttagaagtcaagctacaggccaagtctttgcaagagcaaccagcacttgg 120
           ||||||||  |  | || ||||| |||||||| || |||| | | ||||| ||||| |||
Sbjct: 577 gactggctcatccggagccaagcgacaggccatgtatttgtacgtgcaactagcacatgg 636

                                                                       
Query: 121 gtaatgatgaatgagaagacaaggcgactttcgaaaatgcctgaagaggtgagagctgag 180
           || |||||||| |||||||||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 637 gtgatgatgaacgagaagacaaggcgcctctcgaagatgccagaggaggtgagggctgag 696

                                                                       
Query: 181 attgctccatggtttatagagaaacaagcaattaaagaagaggttcctgagaaaattgct 240
           ||  |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| 
Sbjct: 697 atatctccatggtttatagagaaacaagcaatcaaagaagaggtacctgataaaattgcc 756

                                                                       
Query: 241 aagttggatgataaagctagatatgttgtcactaacttgaagcccaagaggagtgatttg 300
           |||||||| |||||||| ||||||||  || | |||||||||||||| ||||||||||| 
Sbjct: 757 aagttggacgataaagcaagatatgtgatctccaacttgaagcccaaaaggagtgattta 816

                                                                       
Query: 301 gatatgaaccaacatgtcaacaatgtcaagtatgtgagatggatgctagagacacttcct 360
           || |||||||| |||||||||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 817 gacatgaaccaccatgtcaacaatgtgaagtacgtaagatggatgctagagatacttcct 876

                                                                       
Query: 361 gaccaattctttgagaaccatcaactctctggaatcacattagaatacaaaagggaatgt 420
           || || || || |||  |||||| || ||||| |||||| | || || | ||||||||||
Sbjct: 877 gatcattttttggagtcccatcagctttctggtatcacaatggagtatagaagggaatgt 936

                                                 
Query: 421 gggagttcagacattgttgaatctctgtgcgagccaga 458
           || ||| ||||||||||| |||| || |||||||||||
Sbjct: 937 ggaagtgcagacattgttcaatccctatgcgagccaga 974



 Score = 97.6 bits (49), Expect = 9e-20
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                        
Query: 587  taaaatatacacatctccttgtggccaaaggaaagactcaaagtgaagagattgttagag 646
            |||||||||||||||||||| |  |||||||| |  | |||| |||||||||||||||||
Sbjct: 1085 taaaatatacacatctccttctaaccaaaggagaatcccaaaatgaagagattgttagag 1144

                                     
Query: 647  gaaaaacaatatggaagaaaaagct 671
            |||||||||| ||||||||||||||
Sbjct: 1145 gaaaaacaatttggaagaaaaagct 1169