Jatropha Genome Database
- JcCA0127871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0127871.10 + phase: 0 /partial
(1008 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004687 conserved hypothetical protein 724 0.0
>29848.m004687 conserved hypothetical protein
Length = 1635
Score = 724 bits (365), Expect = 0.0
Identities = 821/973 (84%)
Strand = Plus / Plus
Query: 1 aaaaattatcccaggatcaaaactattgtcaataaagttggaacaattacaaacgagttc 60
||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 577 aaaaactatcccaggatcaaaactattgttaacaaagttggaacaattacaaatgagttc 636
Query: 61 cgagtgccaaagtttgaaattttggctggtgaaaatgatatggtcacagaagtgaagcaa 120
||||| |||||||||||| || ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 637 cgagtaccaaagtttgaagttctggctggagaaaatgatatggtcacagaagtaaagcaa 696
Query: 121 tatggagcaacattcaagcttgattatggtttggtttattggaattcaaggttggaacat 180
|| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 697 tacggggcaacattcaagcttgattatggcttggtttactggaattcaaggttggaacat 756
Query: 181 gaacatatgaggctggtttctcaattcaaaccaggggagacaatttgtgacatgtttgct 240
|||||||| |||||||||||||||||| |||||||||| || |||||||| |||||||||
Sbjct: 757 gaacatataaggctggtttctcaattccaaccaggggatacgatttgtgatatgtttgct 816
Query: 241 ggtattggtccttttgcaattccagcagcacaaaaaggatgtgttgtttatgcaaatgac 300
|||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 817 ggtattggtccttttgcaatcccagcagcacagaaaggatgtgtagtttatgcaaatgat 876
Query: 301 ttgaatccagatagctttcagtatttgagacttaatgcaaaactcaacaaggttgatgac 360
|||||||| ||||||||||| ||||||| | ||||||||||| || |||||||||||
Sbjct: 877 ttgaatccggatagctttcaatatttgaagatcaatgcaaaactgaataaggttgatgat 936
Query: 361 cgtatttttccatacagcatggatgctaggaaatttatttctcaattgatggcagcacca 420
| |||||| |||||| |||||||||||||| ||||||||| || ||||||||| |||
Sbjct: 937 ctcatttttgcatacaacatggatgctaggacatttatttcccatctgatggcagtgcca 996
Query: 421 aatcatgaaaatgatttagaatccgaggcttctgctcttaaagcttgtgagaatcacgat 480
| ||||||||||||||||||| | || | |||||||||| ||| ||||||||
Sbjct: 997 tcttatgaaaatgatttagaatctaattctcccactcttaaagcatgtcagaatcacagg 1056
Query: 481 ttacagggcactgaggaaacaaagtcggcagttgatgtgaaggaagcacctgatactgtt 540
|||||| | |||||||||| || ||||||| |||||||||| ||||||| |||
Sbjct: 1057 atacaggcctatgaggaaacacaggttgcagttgtggtgaaggaagtgcctgataaggtt 1116
Query: 541 ccaagtgatcatgagggtactcaagatccatgtagaaaggcagatacttctgtaaccgca 600
|||||||||||||| | | ||||||| |||||| |||| |||| | | |||| | ||
Sbjct: 1117 tcaagtgatcatgagtttgcacaagatcaatgtaggaagggagatgcatttgtagctgcc 1176
Query: 601 gttaaaaggccttcgcattgttttcatgaagaaaatgaaaatactcatggcggtgctatt 660
||||||||||| || ||| | ||| |||| ||||| || | ||||| | |||||||
Sbjct: 1177 gttaaaaggccatctacttgctgtcaggaaggaaatgggaacccccatggtgctgctatt 1236
Query: 661 tccttcacatctaggagaaaaggaagtgtgaataagagaatgagagcctctgagttgccc 720
|| | ||| |||| ||||||||||| | |||||||| ||||||||||||| |||||
Sbjct: 1237 tcttccacttctaaaagaaaaggaagcataaataagaggctgagagcctctgaattgcca 1296
Query: 721 aatactaagccttgggagcatgttgatcatgtcgtaatgaaccttcctgcttctgcttta 780
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1297 aatactaagccttgggagcatgttgatcatgtgataatgaatcttcctgcttctgcttta 1356
Query: 781 cagtttctagatgcatttaggggtgttatcaagaagaaagattggatgggacaacttccc 840
|| ||||||||| | ||||| | ||||| | | |||||| |||| |||| ||||||
Sbjct: 1357 caatttctagattcttttagcagcgttattcaaaggaaagactggaagggagctcttccc 1416
Query: 841 tggatccactgctattgcttcatacgcgcaaatcaaacggaagaaactataatctcggag 900
|| ||||||||||||||||| || || |||| | |||| ||||| |||| ||| ||||
Sbjct: 1417 tgtatccactgctattgctttatgcgggcaactgaaaccaaagaatctattgtcttggag 1476
Query: 901 gcagagtctgccttaggtgcttgtatacaagacccagtatttcatagggtcagggaggtt 960
|| |||||| || |||||||| ||| |||| |||| |||||||||||||||| || |||
Sbjct: 1477 gccgagtctaccataggtgctcctatccaaggcccaatatttcatagggtcagagatgtt 1536
Query: 961 gccccaaataagg 973
|| ||||||||||
Sbjct: 1537 gctccaaataagg 1549