Jatropha Genome Database
- JcCA0127101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0127101.10 - phase: 1 /partial
(623 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013659 conserved hypothetical protein 523 e-148
29825.m000325 conserved hypothetical protein 117 8e-26
30099.m001643 conserved hypothetical protein 109 2e-23
>30170.m013659 conserved hypothetical protein
Length = 771
Score = 523 bits (264), Expect = e-148
Identities = 510/592 (86%)
Strand = Plus / Plus
Query: 30 agtacgattgaaggtgatttttcgtgcacagtagaggttcagcgagcaattccaattttg 89
|||| ||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 175 agtaggattgaaggagatttttcatgcacagtagaggttcaacgagcaattccagttttg 234
Query: 90 aagaaggcctatggtgaccacatgcgtaaagttttgcatgttggccctgatacttgttcg 149
|||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||
Sbjct: 235 aagaaggcctatggtgacagtatgcataaagtcttgcatgttggtcctgatacttgttca 294
Query: 150 gtggtttctttattgctgaaagaagaggaaactgaagcttggggtgtggaaccatatgat 209
|| ||||| ||||| |||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 295 gtaatttctcaattgcggaaagaagaggagactgaagcctggggtgtggaaccatatgat 354
Query: 210 attgaggatgtggatagtcactgccgagcactagtgcaaaagggcaatgtgcgtgttgcc 269
|||||||| || || ||||| |||||||| ||||||| || |||| | | ||||||||
Sbjct: 355 attgaggacgttgacagtcattgccgagcgctagtgcggaaaggcattatacgtgttgct 414
Query: 270 gatatcaagtttcctcttccttacaggccaaagtctttttctcttgtaattgtgtcagat 329
||||| || ||||||||||| ||||||| |||||| ||||||||||||||||| ||||||
Sbjct: 415 gatataaaatttcctcttccatacaggcaaaagtcattttctcttgtaattgtatcagat 474
Query: 330 gcattagactacttgtctccaaggtatctcaacagaacgcttcctgaattggctagggta 389
|| || || |||||| ||||||| || ||||||| ||| ||||| || |||||||| |||
Sbjct: 475 gccttggattacttgactccaagatacctcaacaaaacccttccagatttggctagagta 534
Query: 390 tcgagtgagggtctgataatatttacaggctttccaggtcagcatagatctaaagttgca 449
|| | ||||||||| |||||||||||||||||||||||||| | ||| | |||| ||||
Sbjct: 535 tcaactgagggtcttgtaatatttacaggctttccaggtcagaacagagcaaaaggtgca 594
Query: 450 gaagtatccaagtttggaaaagcagctaagttgaggagtttgtcttggtggacacgatac 509
||| | ||||| ||||||| ||| || || |||||||| | ||||||||| | ||||||
Sbjct: 595 gaattgtccaaatttggaagagcggccaaattgaggagctcatcttggtgggcgcgatac 654
Query: 510 tttatccagaccagtttagacgaaaatgaagctgctgtgaagaagtttgaccaggcagca 569
||||||||||| || ||||| ||||||||||||||| | ||||| ||||| ||||| |||
Sbjct: 655 tttatccagacgagcttagaagaaaatgaagctgcttttaagaaatttgagcaggctgca 714
Query: 570 gcaaagaagtcgtacagcccaggttgccaaattttccacctcaaggcataca 621
|||||||| || || | ||| |||||||||||||||||||||||||||||||
Sbjct: 715 gcaaagaactcatataaccctggttgccaaattttccacctcaaggcataca 766
>29825.m000325 conserved hypothetical protein
Length = 747
Score = 117 bits (59), Expect = 8e-26
Identities = 116/135 (85%)
Strand = Plus / Plus
Query: 85 ttttgaagaaggcctatggtgaccacatgcgtaaagttttgcatgttggccctgatactt 144
|||| ||||| || ||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 206 ttttaaagaaagcatatggtgacagtatgcgcaaggttttgcatgtgggccctgatactt 265
Query: 145 gttcggtggtttctttattgctgaaagaagaggaaactgaagcttggggtgtggaaccat 204
|||| || || ||| |||| |||||||||| ||||||||||| |||||||| |||||||
Sbjct: 266 gttcagtcgtctctcaattgttgaaagaagaagaaactgaagcatggggtgttgaaccat 325
Query: 205 atgatattgaggatg 219
||||||| |||||||
Sbjct: 326 atgatatagaggatg 340
>30099.m001643 conserved hypothetical protein
Length = 786
Score = 109 bits (55), Expect = 2e-23
Identities = 245/303 (80%), Gaps = 4/303 (1%)
Strand = Plus / Plus
Query: 166 tgaaagaagaggaaactgaagcttggggtgtggaaccatatgatattgaggatgtggata 225
|||||||||||||||| ||||| ||||| ||||||||||||||| | || |||||||||
Sbjct: 326 tgaaagaagaggaaacagaagcctggggagtggaaccatatgatttagatgatgtggat- 384
Query: 226 gtca-ctgcc-gagcactagtgcaaaagggcaatgtgcgtgttgccgatatcaagtttcc 283
| || |||| ||| || |||| || ||| ||||||||| || ||||||||||||||
Sbjct: 385 gccagctgcaagagt-cttgtgcgcaaaggccttgtgcgtgtggctgatatcaagtttcc 443
Query: 284 tcttccttacaggccaaagtctttttctcttgtaattgtgtcagatgcattagactactt 343
|| |||||| || |||| || ||||||||||| || || |||||||| || || |||||
Sbjct: 444 actgccttaccgggcaaaatcattttctcttgttatagtttcagatgcgttggattactt 503
Query: 344 gtctccaaggtatctcaacagaacgcttcctgaattggctagggtatcgagtgagggtct 403
||| ||||| ||||| || | ||| |||||||||||||| |||||||| ||| ||| |
Sbjct: 504 gtccccaagatatctgaataaaacacttcctgaattggcaagggtatctgctgatggtgt 563
Query: 404 gataatatttacaggctttccaggtcagcatagatctaaagttgcagaagtatccaagtt 463
|| || ||| | || | |||||||||||||| | | |||||||| ||| |||| |||||
Sbjct: 564 tattattttttctggatatccaggtcagcataaagcaaaagttgctgaactatctaagtt 623
Query: 464 tgg 466
|||
Sbjct: 624 tgg 626