Jatropha Genome Database
- JcCA0126401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0126401.10 + phase: 0 /pseudo
(858 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29706.m001323 protein phosphatase 2c, putative 385 e-106
29912.m005442 protein phosphatase 2c, putative 52 6e-06
>29706.m001323 protein phosphatase 2c, putative
Length = 1611
Score = 385 bits (194), Expect = e-106
Identities = 462/552 (83%), Gaps = 12/552 (2%)
Strand = Plus / Plus
Query: 249 ttcagttcctactgatgctatgattcaggaaagtgacgaagatgaagtatcgtctgttgt 308
|||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||
Sbjct: 264 ttcaattcctactgatgctgtgattcaggaaagtgatgaagatgaagtattgtctgtcac 323
Query: 309 ggaagacactaatggaactatatctgaggagttgttagcattggaagctggatctgaaat 368
||||| || ||||| | ||| ||| ||||||||| ||||||||||| |||||||| ||
Sbjct: 324 agaagatacaaatgggattattactggggagttgttggcattggaagcaggatctgagat 383
Query: 369 aaatttaccaaagtctgttgaaattgaagatatgattgaagatagccaaatcattgctaa 428
|| || |||| |||||||||||||| |||||| |||| ||||||||||
Sbjct: 384 aagcttggcaaaatctgttgaaattga-----tgattg-------ccaactcattgctaa 431
Query: 429 ggctatcattgtggagtcatcaaatgaggtgcaggtgccgacggctaaactcctcatagc 488
|||||| |||||||||||||||||||||||||||||||| | |||||||||||| || ||
Sbjct: 432 ggctattattgtggagtcatcaaatgaggtgcaggtgccaatggctaaactccttattgc 491
Query: 489 agcagtgagcccaaatgcagacatcactgatggctctgagttaagggcctccgcagtggt 548
|||||||||||| | ||||| ||| ||||| |||| || |||||||| || ||||||||
Sbjct: 492 agcagtgagccctagtgcaggcatatctgatagctcagacttaagggcgtctgcagtggt 551
Query: 549 tcttaagttgcccagtgagagcaatctcagtaagggaacttcccgtagtgtatttgagat 608
||||||||| || | ||||| | |||||| || ||| | |||| ||||||||||| |
Sbjct: 552 tcttaagttacctaatgagaaaattctcagcaaaggagcagcccggagtgtatttgaact 611
Query: 609 tgattgcgtacctctttggggttctgtctctatttgcggaagaagaccagaaatggaaga 668
|||||| ||||| |||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 612 tgattgtgtacccctttggggttctgtttctgtttgtggaagaagaccagaaatggaaga 671
Query: 669 ctctcttgcggctgttcctcggtttgcaaaaattcctataaaaatgctcattggcgatca 728
| |||| ||||||||||||||| ||||| ||||||| |||||||||||||| ||||
Sbjct: 672 tgcagttgcagctgttcctcggtttacaaaagttcctatcaaaatgctcattggtgatcg 731
Query: 729 tgtcgtcaacggattaaatgagagtttgacccatctaacaagtcattttttcggtgttta 788
||| || ||||| ||| ||| | ||| |||||| |||||||||||||||| ||||||||
Sbjct: 732 tgttgttgacggaataagtgaaaatttaacccatttaacaagtcatttttttggtgttta 791
Query: 789 tgatggccatgg 800
||||||||||||
Sbjct: 792 tgatggccatgg 803
Score = 163 bits (82), Expect = 2e-39
Identities = 118/130 (90%)
Strand = Plus / Plus
Query: 1 atgtcccctgcggttgcaatgacacttagtttaggcaattctatttgtgataactcaggt 60
|||||||| || ||||||||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 10 atgtccccagcagttgcaatgacgcttagttttggtaattctatgtgtgagaactcaggg 69
Query: 61 attgctacccatgtagaaattacacggctaaagcttgtaacagacgctgtgagcttgctg 120
||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||
Sbjct: 70 attgcaacccatgtagaaattacacgtctaaagcttgtaacagacactgtgagcttgttg 129
Query: 121 tctgatcctg 130
||||||||||
Sbjct: 130 tctgatcctg 139
>29912.m005442 protein phosphatase 2c, putative
Length = 1200
Score = 52.0 bits (26), Expect = 6e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 771 tcattttttcggtgtttatgatggccatgggggcgctcaggt 812
||||||||||||||| |||||||| ||||| ||| |||||||
Sbjct: 462 tcattttttcggtgtctatgatggtcatggtggctctcaggt 503