Jatropha Genome Database
- JcCA0124671.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0124671.10 - phase: 0
(591 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29646.m001113 rac gtpase, putative 575 e-163
29900.m001556 rac gtpase, putative 256 1e-67
29912.m005491 rac gtpase, putative 196 1e-49
29602.m000209 rac gtpase, putative 178 2e-44
29709.m001184 rac gtpase, putative 161 6e-39
30170.m014385 rac gtpase, putative 111 5e-24
30147.m013989 rac gtpase, putative 82 4e-15
28962.m000460 rac gtpase, putative 76 3e-13
>29646.m001113 rac gtpase, putative
Length = 594
Score = 575 bits (290), Expect = e-163
Identities = 497/566 (87%)
Strand = Plus / Plus
Query: 1 atgagcacagccaggtttatcaaatgtgttactgtaggtgatggtgctgttgggaagaca 60
||||||||||| ||||||||||| ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 1 atgagcacagctaggtttatcaagtgtgtaactgttggtgatggagcggttggaaagaca 60
Query: 61 tgtatgctcatctcttacacaagcaacaccttccctactgattatgtccctacagtgttt 120
|| |||||||| |||||||| ||||| |||||||| |||||||| || ||||| ||||||
Sbjct: 61 tgcatgctcatttcttacacgagcaataccttccccactgattacgttcctacggtgttt 120
Query: 121 gataatttcagtgctaatgtggtggttgatggtagcacagtcaatcttggattatgggat 180
|| || |||||||||||||| || |||||||| ||||||||||||||||| || ||||||
Sbjct: 121 gacaacttcagtgctaatgtagttgttgatggcagcacagtcaatcttggcttgtgggat 180
Query: 181 actgcaggacaggaagattataacagactaaggcctctgagttacaggggtgcagatgtg 240
||||||||||||||||||||||||||| | |||||| ||||||| || ||||||||||||
Sbjct: 181 actgcaggacaggaagattataacagattgaggcctttgagttatagaggtgcagatgtg 240
Query: 241 ttccttttggctttctccctaataagtaaagctagctatgagaacatttccaagaagtgg 300
|| |||||||| || ||||| || || |||||||||||||| || |||||||||||||||
Sbjct: 241 tttcttttggccttttcccttatcagcaaagctagctatgaaaatatttccaagaagtgg 300
Query: 301 attcctgagctaaggcattatgccccaactgtaccagttgttctagtgggtactaaacta 360
| |||||||| ||||||||||| |||||||||||| |||| || ||||| || |||||
Sbjct: 301 gtacctgagcttaggcattatgcaccaactgtaccaattgtactggtgggaaccaaactt 360
Query: 361 gatttgcgagacgacaagcagtatttgattgatcatcctggtgcaacaccaatcacaact 420
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 361 gatttgcgagacgacaaacagtatttgatcgatcatcctggtgctacaccaatcacagct 420
Query: 421 tctcagggagaggaactaaagaagatgattggtgctgctgtttacattgagtgcagctca 480
||||||| |||||||| ||||| ||| | |||||||| ||||| || || || || |||
Sbjct: 421 gctcagggggaggaactgaagaaaatggtaggtgctgcagtttatatagaatgtagttca 480
Query: 481 aagactcaacagaatgtgaaggcagtttttgacgcagcaatcaaagttgtcttgcagcct 540
|||||||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||
Sbjct: 481 aagactcaacagaatgtgaaagcagtgtttgatgcagcaatcaaggttgttttgcagcct 540
Query: 541 cctaaacccaagaagagaaaaaggaa 566
|||||||| || |||| |||||||||
Sbjct: 541 cctaaaccgaaaaagaaaaaaaggaa 566
>29900.m001556 rac gtpase, putative
Length = 594
Score = 256 bits (129), Expect = 1e-67
Identities = 360/437 (82%)
Strand = Plus / Plus
Query: 1 atgagcacagccaggtttatcaaatgtgttactgtaggtgatggtgctgttgggaagaca 60
||||| ||||| || ||||| || || || |||||||| ||||| ||||| || |||||
Sbjct: 1 atgagtacagcaagatttattaagtgcgtcactgtaggggatggggctgtaggaaagact 60
Query: 61 tgtatgctcatctcttacacaagcaacaccttccctactgattatgtccctacagtgttt 120
|| |||||||| |||||||| ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 61 tgcatgctcatttcttacactagcaatacttttcctacggattatgttcccacagtattt 120
Query: 121 gataatttcagtgctaatgtggtggttgatggtagcacagtcaatcttggattatgggat 180
|| ||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 121 gacaattttagtgctaatgtggtggtagatggtagtacagtgaatcttggattatgggac 180
Query: 181 actgcaggacaggaagattataacagactaaggcctctgagttacaggggtgcagatgtg 240
|| || || ||||||||||||||||| || ||||| ||||||||||| || || |||||
Sbjct: 181 acggctgggcaggaagattataacaggctgaggccactgagttacagaggagctgatgta 240
Query: 241 ttccttttggctttctccctaataagtaaagctagctatgagaacatttccaagaagtgg 300
||| | |||||||| || || || || || || || ||||||||| ||| ||| ||||||
Sbjct: 241 ttcttgttggctttttctctcattagcaaggccagttatgagaacgtttacaaaaagtgg 300
Query: 301 attcctgagctaaggcattatgccccaactgtaccagttgttctagtgggtactaaacta 360
|| |||||||| | |||||||| |||| ||| ||| |||| || || || ||||| ||
Sbjct: 301 atccctgagctcaaacattatgctccaaatgtgccaattgtgcttgtaggaactaagctt 360
Query: 361 gatttgcgagacgacaagcagtatttgattgatcatcctggtgcaacaccaatcacaact 420
|||||| || | |||||||| || ||||||||||||||||| |||||||| || |||||
Sbjct: 361 gatttgagacaagacaagcaatacttgattgatcatcctggagcaacacccataacaaca 420
Query: 421 tctcagggagaggaact 437
|||| || ||||||||
Sbjct: 421 gctcaaggtgaggaact 437
>29912.m005491 rac gtpase, putative
Length = 630
Score = 196 bits (99), Expect = 1e-49
Identities = 186/215 (86%)
Strand = Plus / Plus
Query: 22 aaatgtgttactgtaggtgatggtgctgttgggaagacatgtatgctcatctcttacaca 81
||||||||||| || || |||||||||||||| ||||| ||||||||||| | ||||||
Sbjct: 22 aaatgtgttacagttggagatggtgctgttggcaagacttgtatgctcatttgttacacc 81
Query: 82 agcaacaccttccctactgattatgtccctacagtgtttgataatttcagtgctaatgtg 141
||||||| ||||||||||||||| | || ||||| ||||||||||||||||||||||||
Sbjct: 82 agcaacaagttccctactgattatatacccacagtatttgataatttcagtgctaatgtg 141
Query: 142 gtggttgatggtagcacagtcaatcttggattatgggatactgcaggacaggaagattat 201
| || ||||| | || |||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 142 gctgtggatgggaacattgtcaatctgggattatgggatactgcaggtcaggaggattat 201
Query: 202 aacagactaaggcctctgagttacaggggtgcaga 236
| |||||| ||||| |||||||||| ||||||||
Sbjct: 202 agcagactgaggccattgagttacagaggtgcaga 236
>29602.m000209 rac gtpase, putative
Length = 597
Score = 178 bits (90), Expect = 2e-44
Identities = 168/194 (86%)
Strand = Plus / Plus
Query: 25 tgtgttactgtaggtgatggtgctgttgggaagacatgtatgctcatctcttacacaagc 84
||||||||||| ||||| ||||||||||| ||||| |||||||| ||||| ||||| |||
Sbjct: 25 tgtgttactgttggtgacggtgctgttggcaagacttgtatgcttatctcctacaccagc 84
Query: 85 aacaccttccctactgattatgtccctacagtgtttgataatttcagtgctaatgtggtg 144
||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| ||||| ||
Sbjct: 85 aacactttccccactgattatgttcctactgtatttgacaatttcagtgccaatgttgtt 144
Query: 145 gttgatggtagcacagtcaatcttggattatgggatactgcaggacaggaagattataac 204
|| ||||| |||||||||||||| || |||||||||||||||| ||||||||||| ||
Sbjct: 145 gtggatgggagcacagtcaatctagggctatgggatactgcaggccaggaagattacaat 204
Query: 205 agactaaggcctct 218
||| |||| |||||
Sbjct: 205 agattaagacctct 218
>29709.m001184 rac gtpase, putative
Length = 609
Score = 161 bits (81), Expect = 6e-39
Identities = 282/349 (80%)
Strand = Plus / Plus
Query: 15 gtttatcaaatgtgttactgtaggtgatggtgctgttgggaagacatgtatgctcatctc 74
||||||||||||||| ||||| || ||||| |||||||| ||||| ||| | || |||||
Sbjct: 33 gtttatcaaatgtgtgactgttggagatggagctgttggaaagacgtgtcttcttatctc 92
Query: 75 ttacacaagcaacaccttccctactgattatgtccctacagtgtttgataatttcagtgc 134
|||||| ||||||||||||||||| |||||||| ||||| || |||||||| ||||||||
Sbjct: 93 ttacactagcaacaccttccctacagattatgttcctactgtttttgataacttcagtgc 152
Query: 135 taatgtggtggttgatggtagcacagtcaatcttggattatgggatactgcaggacagga 194
||||| |||||||||| | || || ||||| || | ||||| ||||| || |||||
Sbjct: 153 caatgtcatggttgatggcaagactgtgaatctgggtctctgggacactgctggtcagga 212
Query: 195 agattataacagactaaggcctctgagttacaggggtgcagatgtgttccttttggcttt 254
||||| ||||| ||||||||||| ||||| || || || ||||| ||| || | || ||
Sbjct: 213 ggattacaacaggctaaggcctctaagttatagaggagctgatgttttcattcttgcctt 272
Query: 255 ctccctaataagtaaagctagctatgagaacatttccaagaagtggattcctgagctaag 314
|| || ||||| | |||||||||| |||||||| || || ||| | || ||||| ||
Sbjct: 273 ttcactcataagcaggcctagctatgaaaacatttcaaaaaaatgggtcccggagctcag 332
Query: 315 gcattatgccccaactgtaccagttgttctagtgggtactaaactagat 363
||||||||||| | ||||| || |||| ||||| ||||||||||||
Sbjct: 333 acattatgccccgtcagtacccattattctggtggggactaaactagat 381
>30170.m014385 rac gtpase, putative
Length = 594
Score = 111 bits (56), Expect = 5e-24
Identities = 146/176 (82%)
Strand = Plus / Plus
Query: 46 gctgttgggaagacatgtatgctcatctcttacacaagcaacaccttccctactgattat 105
||||| || ||||| || ||||| || |||||||| |||||||| |||||||| || |||
Sbjct: 46 gctgtcggcaagacttgcatgcttatttcttacactagcaacactttccctacggactat 105
Query: 106 gtccctacagtgtttgataatttcagtgctaatgtggtggttgatggtagcacagtcaat 165
|| || || || ||||| ||||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 106 gtaccaactgtttttgacaatttcagtgcaaatgtggttgtggatgggagcactgtcaat 165
Query: 166 cttggattatgggatactgcaggacaggaagattataacagactaaggcctctgag 221
| ||||||||||||||||| || ||||| ||||| || ||| |||| ||| ||||
Sbjct: 166 ttgggattatgggatactgctggccaggaggattacaatagattaagacctttgag 221
>30147.m013989 rac gtpase, putative
Length = 636
Score = 81.8 bits (41), Expect = 4e-15
Identities = 236/301 (78%)
Strand = Plus / Plus
Query: 11 ccaggtttatcaaatgtgttactgtaggtgatggtgctgttgggaagacatgtatgctca 70
||||||| ||||| ||||| || ||||| ||||||||||| || || || || ||||| |
Sbjct: 17 ccaggttcatcaagtgtgtgacagtaggagatggtgctgtaggcaaaacctgcatgctta 76
Query: 71 tctcttacacaagcaacaccttccctactgattatgtccctacagtgtttgataatttca 130
| | ||||| || |||| || |||||||||||| | || || |||||||| || ||||
Sbjct: 77 tttgctacactagtaacaagtttcctactgattatatacccactgtgtttgacaacttca 136
Query: 131 gtgctaatgtggtggttgatggtagcacagtcaatcttggattatgggatactgcaggac 190
|||| ||||| || ||||| || | ||| ||||| | || | ||||| || || ||||
Sbjct: 137 gtgcaaatgttgtagttgaaggaaccactgtcaacttaggcctctgggacacagctggac 196
Query: 191 aggaagattataacagactaaggcctctgagttacaggggtgcagatgtgttccttttgg 250
| ||||| ||||||||| ||||||| |||| ||||| || || ||||| || | ||||
Sbjct: 197 aagaagactataacagattaaggcccttgagctacagaggggctgatgtctttgtgttgg 256
Query: 251 ctttctccctaataagtaaagctagctatgagaacatttccaagaagtggattcctgagc 310
||||||||||| ||||| || ||||||||||| || ||||||||| |||||||||
Sbjct: 257 ctttctccctagtaagtcgggcgagctatgagaatgttcttaagaagtgggttcctgagc 316
Query: 311 t 311
|
Sbjct: 317 t 317
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 472 tgcagctcaaagactcaacagaatgtgaaggcagtttttga 512
||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 478 tgcagctcaaaaactcaacagaatgtgaaagctgtttttga 518
>28962.m000460 rac gtpase, putative
Length = 594
Score = 75.8 bits (38), Expect = 3e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 422 ctcagggagaggaactaaagaagatgattggtgctgctgtttacattgagtgcagctcaa 481
|||||||||||||||| | |||| |||||||||| ||| ||||||||| ||||| || |
Sbjct: 422 ctcagggagaggaactgaggaagctgattggtgcgcctgcttacattgaatgcagttcta 481
Query: 482 agactcaacagaatgtgaaggcagtttttgacgcagcaatcaaagttgtc 531
| || || ||||||||||||||||| || || |||||||| |||||||
Sbjct: 482 aaacacagcagaatgtgaaggcagtcttcgatcaagcaatcagagttgtc 531
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 73 tcttacacaagcaacaccttccctactgattatgtccctacagtgtttgataatttcagt 132
|||||||| ||||||||||||||||| |||||||| || || || || || |||||||||
Sbjct: 73 tcttacaccagcaacaccttccctacggattatgtgccaactgttttcgacaatttcagt 132
Query: 133 gctaatgtggt 143
|| ||||||||
Sbjct: 133 gcaaatgtggt 143