Jatropha Genome Database

JcCA0124371.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0124371.10 - phase: 0 
         (288 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27383.m000156 triosephosphate isomerase, putative                     297   2e-80
32915.m000014 triosephosphate isomerase, putative                      50   7e-06

>27383.m000156 triosephosphate isomerase, putative
          Length = 765

 Score =  297 bits (150), Expect = 2e-80
 Identities = 195/210 (92%)
 Strand = Plus / Plus

                                                                       
Query: 79  cattttgaactgaggaaatggcttaaagagaacaccagtccagaagttgctgaaacaaca 138
           ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||| 
Sbjct: 556 cattttgaactgaggaaatggcttaaagagaacaccagttcacaagttgctgcaacaacc 615

                                                                       
Query: 139 aggattatatatggaggatcagtcactgctgcaaactgtaaggaattggcagcacagcct 198
           |||||||| |||||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 616 aggattatctatggagggtcagtcactgctacaaactgcaaggaattggcagcacagcct 675

                                                                       
Query: 199 gatgttgatggctttttagttggtggtgcttctctaaagccggagttcattgaaattatc 258
           ||||||||||| ||| | |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 676 gatgttgatggatttctggttggtggagcctctctaaagccggagttcattgaaattatc 735

                                         
Query: 259 aagtctgcagaggtgaagaaaagtgcctga 288
           ||||| ||||||||||||||||||| ||||
Sbjct: 736 aagtccgcagaggtgaagaaaagtgtctga 765


>32915.m000014 triosephosphate isomerase, putative
          Length = 213

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 169 gcaaactgtaaggaattggcagcacagcctgatgttgatggctttttagttggtggtgct 228
           |||||||| || || ||||||| ||| || ||  ||||||| ||||| ||||| || |||
Sbjct: 94  gcaaactgcaaagagttggcaggacaaccagaccttgatggatttttggttggcggagct 153

                            
Query: 229 tctctaaagccggagtt 245
           ||||| |||||||||||
Sbjct: 154 tctctgaagccggagtt 170