Jatropha Genome Database

JcCA0123391.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0123391.10 + phase: 0 /pseudo/partial
         (339 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008994 phosphomannomutase, putative                            208   2e-53

>30174.m008994 phosphomannomutase, putative
          Length = 735

 Score =  208 bits (105), Expect = 2e-53
 Identities = 154/169 (91%), Gaps = 1/169 (0%)
 Strand = Plus / Plus

                                                                       
Query: 167 atactgcttgagatacctcaatgagtttaatgaaatccacttcttttggtgacaaaactt 226
           ||||||||||||||||||  | ||||| |||||||| ||||| |||||||||||||||||
Sbjct: 561 atactgcttgagataccttgaagagttcaatgaaattcactt-ttttggtgacaaaactt 619

                                                                       
Query: 227 acaagggaggaaatgactatgaaatatatgaatcagatcgaactgtgggtcacacagtta 286
           ||||||||||||||||  ||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 620 acaagggaggaaatgatcatgaaatttatgaatcagagcgaacagtgggtcacacagtta 679

                                                            
Query: 287 ccagccctgatgatacagtggtgcagtgtaaagctctcttcctagcaaa 335
           |||| |||||||||||| ||| ||||||||||||||||||||| |||||
Sbjct: 680 ccagtcctgatgatacaatggagcagtgtaaagctctcttcctcgcaaa 728



 Score =  198 bits (100), Expect = 1e-50
 Identities = 151/168 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattaatgtatctccaattgggcgaaattgcagccaagaagaaagggacgaatttgaa 60
           ||||| |||||||| ||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 367 atgataaatgtatcaccaattgggcggaattgcagccaagaagaaagggatgattttgaa 426

                                                                       
Query: 61  aagtatgacaaggtccataacattcgcccaaaaatggtttctgtactgcgtgagaagttc 120
           ||||||||||||||||| ||||| ||||| |||||||| ||||| || || ||||| |||
Sbjct: 427 aagtatgacaaggtccacaacatacgcccgaaaatggtgtctgtgctacgggagaaattc 486

                                                           
Query: 121 tctcaccttaaccttacattttcaataggtggacagataagctttgat 168
            ||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 487 gctcaccttaacctgacattttcaataggcgggcagataagctttgat 534