Jatropha Genome Database
- JcCA0122821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0122821.10 - phase: 0
(890 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29904.m002941 hypothetical protein 228 5e-59
28206.m000104 DNA binding protein, putative 76 4e-13
29983.m003147 Ethylene-responsive transcription factor, putative 60 2e-08
30190.m010825 DNA binding protein, putative 56 4e-07
29983.m003227 conserved hypothetical protein 52 6e-06
>29904.m002941 hypothetical protein
Length = 1401
Score = 228 bits (115), Expect = 5e-59
Identities = 163/179 (91%)
Strand = Plus / Plus
Query: 712 tttagaggagttagacaaaggcattggggcaaatgggttgcagaaattaggttaccaaga 771
||||||||||| || |||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 808 tttagaggagtgaggcaaaggcattggggaaaatgggttgcagagattagattaccaaga 867
Query: 772 aacagaactagggtttggttaggcacttttgaaacagcagaagaagctgctatggcttat 831
|||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 868 aacagaacaagggtttggttagggacatttgatacagcagaagaagctgctatggcttat 927
Query: 832 gatacagcagcttatatgttacgtggagattatgcacatttgaattttccagatcttaa 890
|||||||| || || ||||||||||| ||||| |||||||| |||||||| ||||||||
Sbjct: 928 gatacagctgcctacatgttacgtggggattacgcacatttaaattttcccgatcttaa 986
Score = 141 bits (71), Expect = 8e-33
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 187 gcttcaggtactaataatttgattggtaatattcctggatttattgaacaggatgttacc 246
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 211 gcttcaggtactaataatttgattggtaatattcctgggtttgttgaacaggatgtttct 270
Query: 247 aaacaaaaacatgcaaattcttttctttcaggattcaattctatcaa 293
||||||| ||||||| ||| |||||||||||||| |||||||||||
Sbjct: 271 gaacaaaaccatgcaagttcatttctttcaggattgaattctatcaa 317
Score = 61.9 bits (31), Expect = 6e-09
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 556 tggctaaaaataaatcaaaccctaacaaattactctaccaaagggtttaatgattattgg 615
||||| ||||| ||||||||| | ||| | ||| | || ||||| |||||||| ||||||
Sbjct: 619 tggctcaaaatcaatcaaaccttgacatactaccccacaaaaggttttaatgactattgg 678
Query: 616 cttggcactacaaagacgcaaccgatgaaatacac 650
||||||||||| ||||| || || |||||| ||||
Sbjct: 679 cttggcactaccaagacacagccaatgaaacacac 713
>28206.m000104 DNA binding protein, putative
Length = 1125
Score = 75.8 bits (38), Expect = 4e-13
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 714 tagaggagttagacaaaggcattggggcaaatgggttgcagaaattaggttaccaagaaa 773
||||||||| || || || ||||||||||||||||| || || ||||| | || | ||
Sbjct: 531 tagaggagtaaggcagagacattggggcaaatgggtagctgagattagacttcctaagaa 590
Query: 774 cagaactagggtttggttaggcacttttgaaacagcagaagaagctgctatggcttatga 833
|||||| || ||||| | ||||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 591 cagaacaagactttggcttggcacttttgacacagctgaagaagctgctttggcttatga 650
Query: 834 tacagcagcttata 847
| ||||||||||
Sbjct: 651 caaggcagcttata 664
>29983.m003147 Ethylene-responsive transcription factor, putative
Length = 636
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 782 gggtttggttaggcacttttgaaacagcagaagaagctgcta 823
|||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 134 gggtctggttaggcacttttgatacagctgaagaagctgcta 175
>30190.m010825 DNA binding protein, putative
Length = 948
Score = 56.0 bits (28), Expect = 4e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 715 agaggagttagacaaaggcattggggcaaatgggttgcagaaattaggttaccaagaaac 774
|||||||| || || || |||||||||||||||||||| |||||||| |||| ||||
Sbjct: 340 agaggagtgaggcagagacattggggcaaatgggttgctgaaattagactacctcaaaac 399
Query: 775 agaactagggtttggttaggcacttttgaaacagcagaag 814
|||| || || |||||||| |||| ||| || |||||||
Sbjct: 400 agaatgagagtctggttaggtacttatgatactgcagaag 439
>29983.m003227 conserved hypothetical protein
Length = 1281
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 785 tttggttaggcacttttgaaacagcagaagaagctgctatggcttatgat 834
|||||||||| || ||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 713 tttggttaggtacatttgatacagctgaagatgctgctatggcctatgat 762