Jatropha Genome Database
- JcCA0121401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0121401.10 - phase: 0 /partial
(1041 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28567.m000052 Transcription factor ICE1, putative 347 8e-95
27451.m000245 hypothetical protein 131 9e-30
>28567.m000052 Transcription factor ICE1, putative
Length = 1410
Score = 347 bits (175), Expect = 8e-95
Identities = 292/331 (88%)
Strand = Plus / Plus
Query: 703 gacccagatcagtctttcaataatgggtcattaaggagcttttggcttcaaagaaaatcc 762
||||| |||||| |||||| ||||| ||||||||||||| |||| || |||| |||||
Sbjct: 1075 gaccctgatcagagtttcaacaatggatcattaaggagctcttggattgaaaggaaatca 1134
Query: 763 aaagacacagaggtagatgttagaataatagatgatgaagttactattaaacttgttcaa 822
|| || || ||||| || ||| | ||||| ||||||||||||||||| ||||||||||||
Sbjct: 1135 aaggatacggaggtggacgttcgtataattgatgatgaagttactatcaaacttgttcaa 1194
Query: 823 agaaagaagatcaattgcttgctgtttgtatccaaagttcttgatgaacttcaactggat 882
|||||||||||||||||||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 1195 cgaaagaagatcaattgcttgctgtttgtctccaaagtccttgatgaacttcagcttgat 1254
Query: 883 cttcatcatgttgctggtggacatgttggtgattactacagcttcttgtttaactccaag 942
|| ||||| ||||||||||| ||| ||||||||||||||||||| | |||||| |||||
Sbjct: 1255 ctccatcacgttgctggtggccatattggtgattactacagctttctctttaacaccaag 1314
Query: 943 atatatgaaggatcttcagtttatgctagtgcaatagcaaacaagttgattgaggtggtg 1002
|||| |||||| |||||||||||||| ||||| |||||||||||| |||||||||||||
Sbjct: 1315 atatttgaaggttcttcagtttatgcgagtgccatagcaaacaagctgattgaggtggta 1374
Query: 1003 gacaggcagtatgcatcaactccatctacaa 1033
|||||||| ||||||||||||||||||||||
Sbjct: 1375 gacaggcattatgcatcaactccatctacaa 1405
Score = 343 bits (173), Expect = 1e-93
Identities = 454/545 (83%), Gaps = 12/545 (2%)
Strand = Plus / Plus
Query: 71 tgcttccaaattcttcaatttctttcacaaaccctaaccatacaactccattaagttttg 130
|||| |||||||||||||| |||||||||||||||| |||||| |||||||| ||||||
Sbjct: 419 tgctaccaaattcttcaatctctttcacaaaccctagccatacggctccattaggttttg 478
Query: 131 ttggagatcttccaatgacagacacagcttctgcctcttctattctctatgacccacttt 190
|||| || ||||| ||| ||||||||||||| || |||||||| || |||||||||||||
Sbjct: 479 ttggtgaccttccgatggcagacacagcttccgcttcttctatcctatatgacccacttt 538
Query: 191 ttcaccttaatcttcctccacaacctcctttatttagggatttgtttcaatccttgcctc 250
||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 539 ttcacttgaatcttcctccacaacctcctttatttagggacttgtttcaatctttgccac 598
Query: 251 cacacggctattccttgcctgggtcaagaggcagttctttgtttggtg-----gt-gtag 304
|||| ||||| || |||||||| |||| | | |||||||||||||| || | ||
Sbjct: 599 cacatggctactctttgcctggctcaatggttaattctttgtttggtgccggcgtcggag 658
Query: 305 gggatgatcatgtagagggaagtgga---ggagtgaatctttatcaagaaggagatggag 361
| ||||| ||||| |||||||||||| |||| |||| ||||| || |||||||
Sbjct: 659 gagatgaccatgttgagggaagtggagatggaggtggcatttaccaagacggtgatggag 718
Query: 362 agcagcagtttgataatggggttttggattttacatgggatatggcttgtatgggtaacg 421
|||||||||||||||||||||| | || || |||||||||||| ||||||||||||| |
Sbjct: 719 agcagcagtttgataatggggtacttgacttcacatgggatatgccttgtatgggtaaag 778
Query: 422 gtagacaaggtgg---aaatatcaaacactttgctactgagcgtcaaaggagacaacaca 478
| ||| | | ||| ||| | |||| ||||||||||||||| |||||||||||||||
Sbjct: 779 gaagagatgctggtaaaaagactaaaccctttgctactgagcgccaaaggagacaacacc 838
Query: 479 ttaaagataagtatgatgacttgagaaatttggtccctaacccttctaagaatgatagag 538
|||| |||||||| | | ||| |||||||| ||||| ||| | ||| |||||||
Sbjct: 839 ttaatgataagtacaaagctttgcagaatttggttcctaatcctacaaaggctgatagaa 898
Query: 539 cctctgtggttggagatgcaattaattacatcaaagaacttcttagaactgtaaatgagc 598
| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||
Sbjct: 899 catctgtggttggagatgcaattgattatatcaaggaacttcttagaactgttaatgagc 958
Query: 599 tgaaa 603
|||||
Sbjct: 959 tgaaa 963
>27451.m000245 hypothetical protein
Length = 468
Score = 131 bits (66), Expect = 9e-30
Identities = 138/162 (85%)
Strand = Plus / Plus
Query: 880 gatcttcatcatgttgctggtggacatgttggtgattactacagcttcttgtttaactcc 939
||||| |||||||||| |||||| || ||||||| || |||||||| | |||||| ||
Sbjct: 304 gatctccatcatgttgttggtggccaaattggtgactattacagctttctttttaacacc 363
Query: 940 aagatatatgaaggatcttcagtttatgctagtgcaatagcaaacaagttgattgaggtg 999
||||||| ||||| ||||||||||| | ||||| |||||||||||||||||||| |||
Sbjct: 364 aagatatttgaagagtcttcagtttacgtaagtgccatagcaaacaagttgattgatgtg 423
Query: 1000 gtggacaggcagtatgcatcaactccatctacaagctgctat 1041
||||||| ||| ||||||||||||| || |||||| ||||||
Sbjct: 424 gtggacaagcattatgcatcaactctatttacaagttgctat 465