Jatropha Genome Database
- JcCA0120961.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0120961.20 - phase: 0 /partial
(606 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008765 H(\+)-transporting atpase plant/fungi plasma membr... 464 e-130
27401.m000290 H(\+)-transporting atpase plant/fungi plasma membr... 56 3e-07
>30174.m008765 H(\+)-transporting atpase plant/fungi plasma membrane
type, putative
Length = 2625
Score = 464 bits (234), Expect = e-130
Identities = 510/602 (84%)
Strand = Plus / Plus
Query: 5 agcttgaagaacagttagcatctgctgtatatcttcaagttagtaccattagccaggcct 64
||||||||||||| |||||||| || ||||||||||||||||| ||||| || ||||| |
Sbjct: 2021 agcttgaagaacaattagcatcagcagtatatcttcaagttagcaccataagtcaggctt 2080
Query: 65 tgatattcgtgacacggtccaggagctggtcatttagagaacgtcctggccttctactgt 124
||||||| || || || || |||||||||||||| ||||| || || ||||| ||
Sbjct: 2081 tgatatttgtcacgcgctcaaggagctggtcattggtggaacgcccaggacttctgcttg 2140
Query: 125 ttaatgcctttatagttgctcaactgattgcaactgtgatctcggccattgcaacatgga 184
|| |||||| ||| |||| ||| || | ||||||||||||||||| | ||||| ||||
Sbjct: 2141 ttgctgccttcataattgcccaattggtcgcaactgtgatctcggctactgcaaactgga 2200
Query: 185 aatttgctggaatcagaagtattggttgggggtggacaggtgtgatttggctgtacaata 244
|||||||||||||||||| ||| |||||||| ||||||||||| |||||| |||||||||
Sbjct: 2201 aatttgctggaatcagaaatatcggttggggctggacaggtgttatttggttgtacaata 2260
Query: 245 tgctgacctacctcctccttgatcctatcaaatttgctgtgcgctatgcactgagtggaa 304
| | |||||| | || || ||||||||||||||||||||||||||||| || |||||||
Sbjct: 2261 ttgtaacctacatgcttctcgatcctatcaaatttgctgtgcgctatgctctcagtggaa 2320
Query: 305 aagcctgggatctagtggtagagcaaaggactgctttcaccaacaaaaagaactttggta 364
||||||||| || ||||| |||||||||||||| ||||| | |||||| | || || |
Sbjct: 2321 aagcctggggactggtggtcgagcaaaggactgcattcacaagcaaaaaagatttcggga 2380
Query: 365 aagaagctcgagaagcagcatgggcagcagaacagcgaacgcttcatggcctccggtctg 424
| || ||||| ||||||||||||||||| || || |||| ||||||||||||| |||||
Sbjct: 2381 aggaggctcgtgaagcagcatgggcagctgagcaaagaacacttcatggcctccagtctg 2440
Query: 425 ctgagagaaaattgttttctgagagaaacacttttggggacattagtatcatggcagaag 484
||| | |||| ||||||| || | ||||| ||| ||| || ||| ||||||||||||
Sbjct: 2441 ttgacacaaaaatgttttcagaaaagaacacgtttaaggaaataagtgtcatggcagaag 2500
Query: 485 aagctaaaaagcgtgcagagattgcaaggatgagggagcttcacacactgaaaggaaagg 544
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| |
Sbjct: 2501 aagctaaaaggcgtgcagagattgctaggatgagggagcttcacactttgaaaggaaaag 2560
Query: 545 tggagtcatttgccaagttaagaggcttggacattgacgccattaaccagcactacaccg 604
| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 2561 ttgagtcatttgccaagctaagaggcttggatattgatgccattaaccagcactacaccg 2620
Query: 605 tc 606
||
Sbjct: 2621 tc 2622
>27401.m000290 H(\+)-transporting atpase plant/fungi plasma membrane
type, putative
Length = 2520
Score = 56.0 bits (28), Expect = 3e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 15 acagttagcatctgctgtatatcttcaagttagtaccattagccaggccttgatattcgt 74
|||| ||||||| ||||| || ||||||||||| ||||| || ||||| ||||| || ||
Sbjct: 1929 acagctagcatcagctgtgtaccttcaagttagcaccatcagtcaggctttgatctttgt 1988
Query: 75 gacacggtccaggagctggtcatt 98
||| || || || |||||||||||
Sbjct: 1989 gactcgatctagaagctggtcatt 2012
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 358 tttggtaaagaagctcgagaagcagcatgggcagcagaacagcgaacgcttcatggcct 416
||||| || |||||||| ||||| |||||||| || || |||||||| |||||||||||
Sbjct: 2272 tttggaaaggaagctcgtgaagcggcatgggcggcggagcagcgaactcttcatggcct 2330