Jatropha Genome Database
- JcCA0120171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0120171.10 - phase: 0 /partial
(359 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013776 mads box protein, putative 329 7e-90
29908.m005982 mads box protein, putative 64 6e-10
29782.m000119 Floral homeotic protein DEFICIENS, putative 60 9e-09
29648.m001978 mads box protein, putative 54 6e-07
>30170.m013776 mads box protein, putative
Length = 693
Score = 329 bits (166), Expect = 7e-90
Identities = 249/276 (90%), Gaps = 3/276 (1%)
Strand = Plus / Plus
Query: 1 atgggaagagtaaagcttcagatcaagagaatagaaaatacaacaaacaggcaagtcact 60
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 atgggaagagtaaagcttcagatcaagagaattgagaatacaacaaacaggcaagtcacc 60
Query: 61 ttctctaaaaggagaaatgggcttatcaagaaagcttacgaactttctgttctttgtgat 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 61 ttctctaaaaggagaaatgggcttatcaagaaagcttatgaactttctgttctctgtgat 120
Query: 121 gttgatgtagctctaatcatgttctctccatctgggagactcagtcttttctctggaaac 180
|||||||||||||| |||||||| |||||||| || ||||| |||||||||||||||| |
Sbjct: 121 gttgatgtagctctcatcatgttttctccatccggcagacttagtcttttctctggaatc 180
Query: 181 aaaagcattgaagaaattctgactagatatatcaatattcctgagcacgaaagaggacg- 239
||||||||||| |||||||||| ||||| | ||| |||| ||||| ||| |||||||
Sbjct: 181 aaaagcattgaggaaattctgatgcgatatgtaaatcttcccgagcatgaacgaggacgg 240
Query: 240 --tcttggtaagttaaaagctgaaggggatcaaagt 273
||| |||||||||||||||||||| || ||||||
Sbjct: 241 gctctcggtaagttaaaagctgaaggcgaccaaagt 276
>29908.m005982 mads box protein, putative
Length = 1044
Score = 63.9 bits (32), Expect = 6e-10
Identities = 110/136 (80%)
Strand = Plus / Plus
Query: 20 agatcaagagaatagaaaatacaacaaacaggcaagtcactttctctaaaaggagaaatg 79
|||| ||||||||||| || || ||||| | ||||| || || || ||| | |||||||
Sbjct: 20 agataaagagaatagagaacactacaaatcgacaagttacattttcaaaacgtagaaatg 79
Query: 80 ggcttatcaagaaagcttacgaactttctgttctttgtgatgttgatgtagctctaatca 139
| || || ||||||||||| ||||||||| | ||||| ||| ||||| | || || ||||
Sbjct: 80 gactcattaagaaagcttatgaactttctatcctttgcgatattgatattgcccttatca 139
Query: 140 tgttctctccatctgg 155
|||||||||| |||||
Sbjct: 140 tgttctctccttctgg 155
>29782.m000119 Floral homeotic protein DEFICIENS, putative
Length = 708
Score = 60.0 bits (30), Expect = 9e-09
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 46 aacaggcaagtcactttctctaaaaggagaaatgggcttatcaagaaagcttacgaactt 105
|||||||||||||||| || || || |||||||| || ||||||||||| | |||||
Sbjct: 46 aacaggcaagtcacttattccaagagaagaaatggtattttcaagaaagctcaagaactc 105
Query: 106 tctgttctttgtgatgttgatgtagctctaatcatgttctct 147
||||||||||||||| | | || |||| ||||||||||||
Sbjct: 106 actgttctttgtgatgctaaagtctctcttatcatgttctct 147
>29648.m001978 mads box protein, putative
Length = 705
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 46 aacaggcaagtcactttctctaaaaggagaaatgggcttatcaagaaagct 96
||||||||||| |||| ||| || |||||||||||| |||| |||||||||
Sbjct: 46 aacaggcaagtgacttactcaaagaggagaaatgggattataaagaaagct 96