Jatropha Genome Database

JcCA0117501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0117501.10 - phase: 0 
         (303 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001173 GTP-dependent nucleic acid-binding protein engD, p...   236   6e-62

>30075.m001173 GTP-dependent nucleic acid-binding protein engD,
           putative
          Length = 1185

 Score =  236 bits (119), Expect = 6e-62
 Identities = 224/259 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctccaaaagcatcgaaatcaaaagaagctccagctgagcgaccaatccttggtcga 60
           ||||| || |||||| ||||||| |||||||| ||||| || ||||||||||||||||||
Sbjct: 1   atgccacccaaagcagcgaaatcgaaagaagcaccagcagaacgaccaatccttggtcga 60

                                                                       
Query: 61  ttctcttctcacctcaagattggaatcgttggattacccaatgttggcaaatctactctt 120
           ||||||||||||||||| ||||| || || |||||||| |||||||| |||||||| || 
Sbjct: 61  ttctcttctcacctcaaaattggcattgtcggattaccaaatgttgggaaatctacacta 120

                                                                       
Query: 121 ttcaacacactaacaaagctgtcaattcctgctgagaacttccctttttgtactattgag 180
           ||||||||| |||||||||| ||||| || |||||||| |||||||| ||||||||||| 
Sbjct: 121 ttcaacacattaacaaagctatcaatcccagctgagaatttccctttctgtactattgaa 180

                                                                       
Query: 181 cctaatgaggcgcgggttaatatccccgatgagagatttgagtggctttgccaactgtat 240
           |||||||||||  |||| ||||| ||||||||  | || || |||||||||||||| |||
Sbjct: 181 cctaatgaggctagggtcaatattcccgatgaacgcttcgattggctttgccaactttat 240

                              
Query: 241 aagccaaaaagcgaggttt 259
           || || ||||| |||||||
Sbjct: 241 aaacccaaaagtgaggttt 259