Jatropha Genome Database
- JcCA0116311.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0116311.10 + phase: 0 /partial
(1093 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006435 origin recognition complex subunit, putative 1066 0.0
>30169.m006435 origin recognition complex subunit, putative
Length = 2535
Score = 1066 bits (538), Expect = 0.0
Identities = 937/1070 (87%), Gaps = 15/1070 (1%)
Strand = Plus / Plus
Query: 1 atggaatctattattcggcgttgttctgttatgaaccccaaggaatatgcaaaggcaagt 60
||||||||||||||||||| ||| | ||| |||| ||||||||| ||| |||||||||
Sbjct: 979 atggaatctattattcggcattgctttgtcatgagccccaaggagtatagtaaggcaagt 1038
Query: 61 aatgaaggagatgatgttttcttatgtgaatatgaatatgacatccattggcacactttt 120
||||||||||||||| |||||||||| || ||||| ||||||||| ||||| ||||
Sbjct: 1039 aatgaaggagatgatattttcttatgcgagtatgagtatgacatcatctggcattctttc 1098
Query: 121 aagcgtctagctgaggttgataattgtgaagaggatggtgaagatgctgacagtgatgaa 180
||||||||||||||| |||||||| |||| |||| |||| | |||||||
Sbjct: 1099 aagcgtctagctgagattgataatggtgaggaggt-----aaga-------aatgatgaa 1146
Query: 181 gattggaattcttccaaggacgcagaatctgatacagatgaagacattgagtatgaagag 240
|| ||||||| ||||||||| ||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 1147 gactggaattgttccaaggatgcagaatctgagacggatgaagacatggagtatggagag 1206
Query: 241 gaaagtgtgaagaacttacaagccaaagcatcctcaactcatgtcttggctgctaactta 300
|||| |||||||||||||||||||| ||||| || | |||||| ||||||||||| | |
Sbjct: 1207 gaaaatgtgaagaacttacaagccagagcattcttatctcatgagttggctgctaattca 1266
Query: 301 cgaaaaggtcagttcttcgggcttcaaaggataggggtaaaacgaatcccggaacatgtg 360
|| || || |||||||| || ||||| | ||| |||| ||| |||||||| ||||||
Sbjct: 1267 cggaagggccagttctttggacttcagaagattggggcaaagaagatcccggagcatgtg 1326
Query: 361 aggtgtcacaagaagactgaactggagaaagcaaaggcaacgcttctgctggcaacattg 420
| |||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||
Sbjct: 1327 cgatgtcacaagaagactgaactggagaaagcaaaagcaacacttttgctggcaacgttg 1386
Query: 421 cccaagtctcaaccttgcaggaacaaggaaatggaagagataactgcatttataaaaggt 480
|| |||||| |||||||||||| || |||||||| ||| |||||||||| |||||||||
Sbjct: 1387 ccaaagtctttaccttgcaggaataaagaaatggaggaggtaactgcattcataaaaggt 1446
Query: 481 gccatctatgatgatcaatgtctgggtcgttgcctttacattcatggtgttcctggaact 540
||||| | |||||||||||| ||||||| |||||||| |||||||||||||| ||||||
Sbjct: 1447 gccatatgcgatgatcaatgtttgggtcgctgcctttatattcatggtgttccaggaact 1506
Query: 541 ggcaagacgatgagcgtacttgcagtaatgaggaacctaaaatctgaagttgatgcaggg 600
|||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1507 ggcaagacaatgagtgtacttgcagtaatgaggaacctaagatctgaagttgatgcagga 1566
Query: 601 aatatgcgaccatactgttttgtggaggtcaatggtctaaagttagcatcaccagaaaat 660
||||| ||| || |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1567 aatataaaaccgtattgttttgtggaggttaacggtctaaagttagcatcaccagaaaat 1626
Query: 661 atttatagggttatctatgaagcattaagtggacatagggttagctggaagaaggctctt 720
|| || |||||||| ||||||||||||| |||||| || ||| | ||||| ||||||||
Sbjct: 1627 atctacagggttatatatgaagcattaactggacacagagttggttggaaaaaggctctc 1686
Query: 721 catttgctgaatgagcgattttcagatggcaagaagg---gaaaaggggatgaccggcct 777
|||||||||||||||||||||||||||| ||||| | | ||||| |||||||| |||
Sbjct: 1687 aatttgctgaatgagcgattttcagatggaaagaaagtgcgcaaaggagatgaccgccct 1746
Query: 778 tgtattctacttattgatgaacttgatctgcttgtaacccgaaatcagtcggttctatac 837
||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1747 tgtattctactcattgatgaacttgatctacttgtgacccgaaatcagtcggttctatat 1806
Query: 838 aatattcttgattggcctactaagccacattcaaaattgattgtgataggaattgccaat 897
||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 1807 aatatccttgactggcctactaagcctcattccaaattgattgtgataggaattgcaaat 1866
Query: 898 actatggatcttccagaaaagttgcttcctcgtatttcaagccgtatgggtatccaaagg 957
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1867 actatggatcttccagaaaagttacttcctcgtatttcaagccgtatgggtatccaaagg 1926
Query: 958 ctttgctttggaccctataattatcagcagcttcaagaaatcatttccagtcgcctcaaa 1017
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1927 ctttgctttggaccctataattatcagcagcttcaagaaataatttcaagtcgcctcaaa 1986
Query: 1018 ggaattgatgtatttgaaaagcaagctatagaatttgcttcaagaaaggt 1067
|||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 1987 ggaattgatgcatttgaaaagcaagccatagaatttgcttccaggaaggt 2036