Jatropha Genome Database

JcCA0115811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0115811.10 - phase: 0 /partial
         (783 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28653.m000059 pin2-interacting protein x1, putative                   361   4e-99

>28653.m000059 pin2-interacting protein x1, putative
          Length = 1218

 Score =  361 bits (182), Expect = 4e-99
 Identities = 317/362 (87%)
 Strand = Plus / Plus

                                                                       
Query: 72  tgagactgaagctttttatcctgaagaattcaaagttgaagaggtttctccagaatggtg 131
           ||||||||||||||| ||| ||| ||||| ||||| |||||  || |||| |||||||||
Sbjct: 492 tgagactgaagctttgtattctgcagaatgcaaagctgaagctgtatctcaagaatggtg 551

                                                                       
Query: 132 gggctataaattgggatttgtcccaggaggtttacttggagctcaaaataaaaagaaatc 191
           |||||||||||  || |||||| |||||||||| |||||||| |||| ||||||||||||
Sbjct: 552 gggctataaatctgggtttgtctcaggaggttttcttggagcacaaagtaaaaagaaatc 611

                                                                       
Query: 192 aagcaaaactggaaatgctcaaaagtgtaatgagagaactgcatttcttgaagaagatca 251
           ||  | ||||| ||||| ||||||   ||||||||| ||||  |||| ||||||||||||
Sbjct: 612 aaatagaactgtaaatggtcaaaatcataatgagaggactgtctttcatgaagaagatca 671

                                                                       
Query: 252 agagaacctttacaaacttgtccaagataatgccacagctggaaagcaaggactgggcat 311
           ||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 672 agagaacctctataaacttgtccaagataatgccacagctggaaagcaaggattgggcat 731

                                                                       
Query: 312 taaaagtcaaccaaagaaaatagccggtgtccgcttccagggaaaaaagacatcttttag 371
           ||| |||||||||||||||||||| ||||| ||||| |||||||||| |||||| |||| 
Sbjct: 732 taagagtcaaccaaagaaaatagctggtgttcgctttcagggaaaaaggacatcatttac 791

                                                                       
Query: 372 tgacagtgatgatgaggattctgctgatgatgatgtggattctgctgattttgattcctc 431
           |||||||||||||||||| ||||| || || ||  ||||||||||||||| |||||||||
Sbjct: 792 tgacagtgatgatgaggactctgccgacgaagacatggattctgctgattatgattcctc 851

             
Query: 432 ag 433
           ||
Sbjct: 852 ag 853



 Score =  143 bits (72), Expect = 2e-33
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                        
Query: 620  taaagctaaaaaagctgaaagttcttattgaagagcattcatctactgttttttccaatt 679
            |||||||||||||||| ||| ||||||| ||||| ||||||||| ||| |||||||| ||
Sbjct: 1052 taaagctaaaaaagctaaaaattcttatcgaagaacattcatcttctgctttttccagtt 1111

                                                                        
Query: 680  tctcttcaaaaagagatgctcttactcacctgaaacaaaagttggaaggcagtcagaagt 739
            |||||||||||| ||||||| |  || ||||||||| |||| |||||||||||| |||||
Sbjct: 1112 tctcttcaaaaaaagatgctatagcttacctgaaacgaaagctggaaggcagtcggaagt 1171

                                                        
Query: 740  tctgtgtagatggaaagagagtgagtctcatgtgcagaagaggc 783
            ||| | |||| || || |||||||||||||  ||||| ||||||
Sbjct: 1172 tctctatagagggtaaaagagtgagtctcagatgcaggagaggc 1215