Jatropha Genome Database
- JcCA0109511.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0109511.10 + phase: 0
(972 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29769.m000449 hypothetical protein 751 0.0
>29769.m000449 hypothetical protein
Length = 1254
Score = 751 bits (379), Expect = 0.0
Identities = 775/907 (85%), Gaps = 2/907 (0%)
Strand = Plus / Plus
Query: 13 gaacttgttccagaaaaagagaaaattgaagatggaaaagagggaggccccacattccac 72
||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||
Sbjct: 13 gaacttgttccagaaaaagagaaaattgaagatggaaaagagggatgcccttcatttcat 72
Query: 73 tgtgacctttatgatgcagatctagttcgcagaatagcccaagtgttcctacctggatta 132
|||||||||||||||||||| | |||| || |||||| |||||| |||| |||||||||
Sbjct: 73 tgtgacctttatgatgcagaaattgttcacaaaatagctcaagtgctcctgcctggatta 132
Query: 133 tcggcagcttgtgttgacaacacaacaggtggtatattcaggtcccctgcttcagtggct 192
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcagcagcttgtgttgacaacacaacaggtggtatattcaggtcccctgcttcagtggct 192
Query: 193 gttgagatgaggaaagaaatgattgaatatctcaccatgcgaagtgaaacttttgttgct 252
||||| |||| ||||||||||| || |||||||| ||||||||||| ||||||||||
Sbjct: 193 gttgacttgagaaaagaaatgatagactatctcactcagcgaagtgaaagttttgttgct 252
Query: 253 gaaactattatcttggaaggtggtcaaaatgaagagatatccgaccatccttacgatatt 312
||| ||||||||||||||| ||||| |||| |||| |||| ||||| ||||| ||||||
Sbjct: 253 gaatctattatcttggaagatggtccaaatacagaggtatctgaccacccttatgatatt 312
Query: 313 atttctgattttgttgatgactttgcaagttcaaagaggaatttctttagtcgggttcaa 372
||| ||||||||||||| || |||||||||||||||||||||||||||||||||||| |
Sbjct: 313 attgctgattttgttgacgattttgcaagttcaaagaggaatttctttagtcgggtttca 372
Query: 373 ggatggatactgagcgaaaagagagaagacaagatagatgattttgtacaggagatggaa 432
|| ||| || |||| ||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct: 373 gggtggctattgagtgaaaagagagaagacaatgtagatgattttgcacaagagatggaa 432
Query: 433 gtaaatggattttggttgagtgataggagagaggtaattgcgcaaaatttggttaagaat 492
||||||| |||||||||| ||||||||||| || |||| || | | |||||||||||
Sbjct: 433 ataaatgggttttggttgatggataggagagaattagttgcccagactctggttaagaat 492
Query: 493 gttgactacaaaaacatattttactgtgacaagaaattctatactgctgaagaactagcc 552
|| |||| ||| |||| |||| ||||||||||||||||| | ||||| ||||| ||||||
Sbjct: 493 gtagacttcaagaacacatttcactgtgacaagaaattcaacactgccgaagagctagcc 552
Query: 553 gagcatgtcatcaactgtgattttaggactgtaaactgcacaaatgatggctgtgtatcn 612
|||||| ||||||| | || ||| || | ||||||| |||||| || ||| |
Sbjct: 553 aggcatgttgtcaactgcaacttcaggtctatgaactgcagaaatgagggatgtaacgca 612
Query: 613 nnnnnnngtgcaagccaattggagaagcatgattcgacttgtcctttcaaaataatccct 672
|||||||||| |||||||| |||||||| | ||||||||| || ||||||||
Sbjct: 613 atcttttgtgcaagccatttggagaaccatgattccatttgtccttttaagataatccca 672
Query: 673 tgcgaacagaagtgctcagatcacatcatgagacgtgaaatggaccgacattgcataact 732
|| |||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||
Sbjct: 673 tgtgaacagaagtgctcagataacatcatgagacgtgaaatggacaggcattgtataact 732
Query: 733 gtctgtccaatgaagcttgtgaactgtcc-ttctatgctgtgggttgtcccagccgccat 791
||||||||||||||||||||||||||||| |||||||||||||| ||| | | || | ||
Sbjct: 733 gtctgtccaatgaagcttgtgaactgtcctttctatgctgtgggctgt-caatccactat 791
Query: 792 aacaaggagtatgattcagcagcactgtttagatgacctcaattcacacttggtatacgc 851
| || || |||||||||| |||| |||| ||||||||| | | ||||||||||| ||
Sbjct: 792 agcacggcatatgattcagaagcattgttcggatgacctccagttacacttggtatgtgc 851
Query: 852 acttaaaaatattcacaaagaagcatctgaggaggatttgaaagatcggttggatcagat 911
|||||||||||| ||||| | |||||||||||||||||||||| | ||| ||||||| ||
Sbjct: 852 acttaaaaatatccacaagggagcatctgaggaggatttgaaacaacgggtggatcaaat 911
Query: 912 aatgcag 918
| |||||
Sbjct: 912 agtgcag 918