Jatropha Genome Database

JcCA0109411.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0109411.10 + phase: 0 /partial
         (271 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28623.m000404 6,7-dimethyl-8-ribityllumazine synthase, putative       331   1e-90

>28623.m000404 6,7-dimethyl-8-ribityllumazine synthase, putative
          Length = 666

 Score =  331 bits (167), Expect = 1e-90
 Identities = 245/271 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttgtagcacggttcaatgagattgtgacaaagcatcttttggagggtgccttggaaact 60
           |||||||| ||||| || |||||||| |||||| | ||||||||||| || |||||||||
Sbjct: 250 gttgtagcgcggtttaacgagattgttacaaagaagcttttggagggagctttggaaact 309

                                                                       
Query: 61  ttcaagaaatattcagttaaggaagaagatgttgatgttgtgtgggttcctggtagcttt 120
           ||| ||| |||||||||||| ||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ttcgagagatattcagttaatgaagaagatgttgatgtggtgtgggttcccggcagtttt 369

                                                                       
Query: 121 gaaataggcattgttgcagaaaggctagggaagtcaggaaattatcatgcaattttatgt 180
           ||||||||  |||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 370 gaaataggtgttgttgcagaaaggctagggaagtcacggaaatatcatgcaattttatgt 429

                                                                       
Query: 181 attggagctgtgataagaggtgatactacccactatgatgctgttgctaattcagcagca 240
           |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 430 attggagctgtggtaagaggtgatactactcactatgatgcagttgctaattcagcagca 489

                                          
Query: 241 tctggcgtactttcagctggtataaattcag 271
           ||||| ||||||||||||||| | |||||||
Sbjct: 490 tctggagtactttcagctggtctgaattcag 520