Jatropha Genome Database

JcCA0101011.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0101011.10 + phase: 1 /partial
         (845 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29889.m003281 DELLA protein GAI1, putative                             76   4e-13

>29889.m003281 DELLA protein GAI1, putative
          Length = 1365

 Score = 75.8 bits (38), Expect = 4e-13
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                       
Query: 17  aatcaaaactggggggcactgcactatattaatgcaagctcttgcaaatcaaaacaaatg 76
           |||||||||||| |||||||||||  | || |||||||||||||| |||| | |  ||||
Sbjct: 558 aatcaaaactggagggcactgcacggtgttgatgcaagctcttgcgaatcgacaggaatg 617

                                 
Query: 77  cccaattgagcttctaaagata 98
           ||||||||||||| ||||||||
Sbjct: 618 cccaattgagcttttaaagata 639



 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 121/149 (81%), Gaps = 3/149 (2%)
 Strand = Plus / Plus

                                                                        
Query: 672  aagaattttgcttcaggaaaatcttgtacgcttgacaggaatgataaatccattattact 731
            ||||| |||||||| |||||||| ||   ||||| ||| ||||  |||| | |||| |||
Sbjct: 1210 aagaactttgcttctggaaaatcatgcttgcttgtcagaaatggaaaatgccttatgact 1269

                                                                        
Query: 732  agatggaagggaactccacttctttctctttctgcttggaagtttcatcaacaagaccag 791
             | ||||||| ||||||||||||||| |||||||||||||| ||    |||||||| || 
Sbjct: 1270 ggttggaaggaaactccacttctttcactttctgcttggaactt---ccaacaagaacac 1326

                                         
Query: 792  tcgaagaagagttgcgctaagaaatctaa 820
            || ||||||| |||| | |||||||||||
Sbjct: 1327 tcaaagaagaattgcaccaagaaatctaa 1355