Jatropha Genome Database

JcCA0098341.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0098341.10 + phase: 1 /pseudo/partial
         (365 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29698.m000067 bacteriochlorophyll synthase, putative                  416   e-116

>29698.m000067 bacteriochlorophyll synthase, putative
          Length = 1299

 Score =  416 bits (210), Expect = e-116
 Identities = 310/342 (90%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    caggcctctaatatttgcaactgctttcatgagcttcttttcagttgttatagctattat 66
            |||||||||||| ||||| ||||| || ||||||||||| |||||||||||||| |||||
Sbjct: 864  caggcctctaatttttgctactgcatttatgagcttcttctcagttgttatagc-attat 922

                                                                        
Query: 67   tcaaggatattcctgatattgaaggggataagatatttggtattcaatcctttacagtac 126
            |||||||||| |||||||||||||| ||||||||||||||||| | ||||||||| || |
Sbjct: 923  tcaaggatatacctgatattgaaggtgataagatatttggtatccgatcctttactgtgc 982

                                                                        
Query: 127  gcttgggccaagagagggttttctggatctgcatttctctgcttgaaatagcttatggtg 186
            |||||||||| ||| ||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 983  gcttgggccaggagcgggttttctggatttgtatttctctgcttgaaattgcttatggtg 1042

                                                                        
Query: 187  ttgctattttagttggcgcagcatcttcctatacctggagcaagtgtgtcacggttgtgg 246
            |||||||||||||||| ||||||||||| || ||||||||||||||| |||||||| |||
Sbjct: 1043 ttgctattttagttggagcagcatcttcttacacctggagcaagtgtatcacggttctgg 1102

                                                                        
Query: 247  ggcatgctatcttggctgcaatactatggaaccgtgccaaatctgttgatctcaagagca 306
            ||||||  |||||||||   || || |||||||||||||||||||||||||| |||||||
Sbjct: 1103 ggcatgtcatcttggctttgatgctgtggaaccgtgccaaatctgttgatcttaagagca 1162

                                                      
Query: 307  aagctgcaataacttcctgctatatgtttatttggaaggtaa 348
            |||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1163 aagctgcaataacttcctgctacatgttcatttggaaggtaa 1204