Jatropha Genome Database
- JcCA0091211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0091211.10 - phase: 0 /pseudo/partial
(730 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008586 DNA replication licensing factor MCM2, putative 702 0.0
>30128.m008586 DNA replication licensing factor MCM2, putative
Length = 2793
Score = 702 bits (354), Expect = 0.0
Identities = 616/700 (88%), Gaps = 15/700 (2%)
Strand = Plus / Plus
Query: 33 cagatccatctaaacacaatgattcgtattggaggagttgtgactagacgttctggtgtg 92
||||||||| ||||||| ||||||||||| || |||||||| |||||||||||||| ||
Sbjct: 955 cagatccatttaaacaccatgattcgtatcgggggagttgtcactagacgttctggagta 1014
Query: 93 ttcccgcagttgcagcaggtaaaatatgactgcaacaagtgtggggcgattttaggacca 152
||||| |||||||| ||||| |||||||| ||||||||||||||||| || ||||||||
Sbjct: 1015 ttcccacagttgcaacaggtgaaatatgattgcaacaagtgtggggcaatcttaggaccc 1074
Query: 153 ttctttcagaattcatattcagaagtcaaagttggctcttgccctgaatgccaatcaaaa 212
|||||||||| ||| ||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 1075 ttctttcagagttcctattcagaagttaaggttggctcttgccctgaatgccagtcaaaa 1134
Query: 213 ggaccatttactgttaacatagagcaga-----------aattaccagaaacttacactc 261
|||||||| |||||||| || ||||||| || |||||||||||||| |||
Sbjct: 1135 ggaccattcactgttaatattgagcagacaatttaccggaactaccagaaacttacgctc 1194
Query: 262 caggaaagccccggaattgtgcctgctggtcggcttccaagatacaaggaagtgatacta 321
|||||||| || |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 1195 caggaaagtcctggaattgtgcctgctggtcggcttcccagatacaaagaagtgatactg 1254
Query: 322 ttgaatgatttgattgattgtgcccgcccaggggaagagattgaggtcacgggcatatat 381
|||||||||||||||||||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct: 1255 ttgaatgatttgattgattgtgcccgtcccggggaagagatcgaggtcactggcatttac 1314
Query: 382 acaaacaactttgacttatctctgaacacaaaaaatggatttcctgtctttgccacagta 441
||||| ||||||||||||||| |||||||||| || || ||||||||||||||||| ||
Sbjct: 1315 acaaataactttgacttatctttgaacacaaagaacggttttcctgtctttgccactgtc 1374
Query: 442 attgaagcaaaccatgtaacaaagaagcaagacctcttttcagcctataaacttacacag 501
|||||||| |||||||||||||||||||| ||||||||||| || || ||||| ||||||
Sbjct: 1375 attgaagctaaccatgtaacaaagaagcaggacctcttttctgcttacaaactaacacag 1434
Query: 502 gaggacaaagaagaaattgaaaagcttgctaaagacccaagaataggagaaaggattatc 561
|||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 1435 gaggacaaagaagagattgagaagcttgctaaagacccgaggataggagaaaggattatc 1494
Query: 562 aagtcaattgccccatcaatatacggccatgaagacattaaaactgcaatagcccttgcc 621
|| |||||||| |||||||| || ||||| || ||||||||||||||| |||| ||||||
Sbjct: 1495 aaatcaattgctccatcaatctatggccacgaggacattaaaactgcattagctcttgcc 1554
Query: 622 atgtttggaggccaagagaaaaatgttagaaggtaagacaccggctccgaggggacagtc 681
||||||||||| ||||||||||||||| ||||| ||| ||| | ||| |||| |||| ||
Sbjct: 1555 atgtttggaggtcaagagaaaaatgtt-gaagggaag-cacagactcagaggagaca-tc 1611
Query: 682 aatgtacttctcatgggtagatccaggcacagcaaaatct 721
||||| |||||| | ||| |||||||||||||||||||||
Sbjct: 1612 aatgttcttctcttaggt-gatccaggcacagcaaaatct 1650