Jatropha Genome Database

JcCA0090671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0090671.10 - phase: 0 /partial
         (357 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29864.m001463 Angio-associated migratory cell protein, putative       321   2e-87

>29864.m001463 Angio-associated migratory cell protein, putative
          Length = 1416

 Score =  321 bits (162), Expect = 2e-87
 Identities = 237/262 (90%)
 Strand = Plus / Plus

                                                                       
Query: 4   cacaaaaaatggattactggcatctcttgggaaccagtccacttgaatgcaccatgccgc 63
           |||||||||||||| ||||| ||||| |||||||||||||||||||  || || ||||| 
Sbjct: 568 cacaaaaaatggatcactggtatctcctgggaaccagtccacttgagcgctccgtgccgt 627

                                                                       
Query: 64  cggtttgttagtgctagcaaagatggtgatgcacgcatttgggatgtttcattaaggaaa 123
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| 
Sbjct: 628 cggtttgttagtgctagcaaagatggtgatgcacgcatatgggacgtttcattgaggaag 687

                                                                       
Query: 124 tgtgttatttgtcttactggccacacacttgcaataacatgtgtgaaatggggtggagat 183
           |||||||||| ||| ||||| || |||||||| ||||| |||||||||||||||||||| 
Sbjct: 688 tgtgttatttctctcactggtcatacacttgctataacttgtgtgaaatggggtggagac 747

                                                                       
Query: 184 ggattaatttatacaggctcccaagattgtaccatcaaagtctgggagaccacacagggg 243
           ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| 
Sbjct: 748 ggagtaatttatacaggctcccaagattgtaccatcaaagtttgggagactacacaggga 807

                                 
Query: 244 aagttagttcgtgaattaaagg 265
           |||||| |||||||||| ||||
Sbjct: 808 aagttaattcgtgaattgaagg 829