Jatropha Genome Database

JcCA0088981.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0088981.10 + phase: 1 /pseudo/partial
         (356 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014368 superoxide dismutase [fe], putative                     240   5e-63

>30147.m014368 superoxide dismutase [fe], putative
          Length = 918

 Score =  240 bits (121), Expect = 5e-63
 Identities = 191/213 (89%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   aatgcagtaaatcctcgcccgtcagaagaggacaaaaaagcttgttgtggtgaagagtcc 64
           |||||| |||||||| | || ||||| ||||||||||| ||| || ||||||||||||||
Sbjct: 565 aatgcattaaatccttgtccatcagaggaggacaaaaa-gctagtagtggtgaagagtcc 623

                                                                       
Query: 65  caatgctgtaaacccacttgtttgggattactctccactccttactattgatgtctggga 124
           |||||||||||  || |||||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 624 caatgctgtaattccccttgtttgggattactatccacttcttactattgatgtttggga 683

                                                                       
Query: 125 gcatgcttactaccttgactttcagaatcgacggcctgattatatatcaacctttataga 184
           |||||||||||||||||||||||||||||| ||||||||||| ||||| || ||| ||||
Sbjct: 684 gcatgcttactaccttgactttcagaatcggcggcctgattacatatccacttttctaga 743

                                            
Query: 185 gaagcttgtatcatgggaagcagttagtgcaag 217
            ||||||||||||||||||||||| || |||||
Sbjct: 744 aaagcttgtatcatgggaagcagtcagcgcaag 776