Jatropha Genome Database
- JcCA0080851.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080851.20 - phase: 0
(546 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004629 mads box protein, putative 654 0.0
>29929.m004629 mads box protein, putative
Length = 549
Score = 654 bits (330), Expect = 0.0
Identities = 493/546 (90%), Gaps = 6/546 (1%)
Strand = Plus / Plus
Query: 1 atgctcaaaacacttgagaggtaccagaaatgcaactatggagcaccggagacaaatgtg 60
||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 10 atgctcaaaactcttgagaggtaccagaaatgcaactatggagcaccagagccaaatgtg 69
Query: 61 tcgacaagggaggctttgcaggagctaagcagccagcaagaatatttgaagcttaaagct 120
|| |||||||||||||| |||||||| || ||||| || ||||||||||||||||||
Sbjct: 70 tctgcaagggaggctttg---gagctaagtagtcagcaggagtatttgaagcttaaagct 126
Query: 121 cgctatgaagccctgcaacgatcccaaagaaatcttcttggagaagaccttggccctcta 180
||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 127 cgctatgaagccctgcaacgatctcaaaggaatcttcttggagaagatcttggccctctc 186
Query: 181 agtagcaaggagctcgagtcacttgaaaggcagctagatatgtctttgaagcagatcaga 240
|| |||||||| || |||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 187 agcagcaaggaccttgagtcacttgaaaggcagcttgatatgtcattaaagcagatcagg 246
Query: 241 tcaacgcggacccaatacatgctggatcagctgactgatctacaacgcaaggaacacatg 300
||||| ||||| || || ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 247 tcaacacggactcagtatatgctagatcagctcactgatctacaacgcaaggaacacatg 306
Query: 301 ctgaacgaagcaaataagaccctgaaacaaaggctggttgaaggataccatgtaaataca 360
||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 307 ctgaacgaagcaaataagaccctgaaacaaaggttggtggaaggataccaagtaaatgca 366
Query: 361 atgcagttgaatctaggtgcagaagatgttgggtttggccgccaagcagctcaacctcag 420
|||||| |||||| | ||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 367 atgcagctgaatccaagtgcagaagatgtagggtttggccgccaagcagctcagcctcag 426
Query: 421 ggcgatggtttctttcatccattggagtgtgaacccaccttacaaattggataccagcca 480
|| ||||| ||||||||||| || || ||||||||||| ||||||||||||||||| ||
Sbjct: 427 ggtgatggcttctttcatcccttagattgtgaacccactttacaaattggataccaccct 486
Query: 481 gatccaataacagtagtgactgctggcccaagtgtgaataattacatgccaggatggtta 540
|||| ||| |||||| |||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 487 gatcaaat---agtagtcactgctggcccaagtgtgaataattatatgtcaggatggtta 543
Query: 541 ccttga 546
||||||
Sbjct: 544 ccttga 549