Jatropha Genome Database
- JcCA0080721.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080721.20 + phase: 0
(1728 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008951 conserved hypothetical protein 634 0.0
>30174.m008951 conserved hypothetical protein
Length = 1341
Score = 634 bits (320), Expect = 0.0
Identities = 646/755 (85%), Gaps = 6/755 (0%)
Strand = Plus / Plus
Query: 770 tctgggtagagggtcttgttcctggcattgatttttgcaaccatgctacaaatttgaagg 829
|||||||||||||||||||||||||||| ||||||||||| |||| || ||||||
Sbjct: 395 tctgggtagagggtcttgttcctggcatagatttttgcaatcatg------atctgaagg 448
Query: 830 cagcagcaacatgggaggttgatggaacaggcttggtaactggaattcctttctccatgt 889
| |||||||||||||||||||||||||| |||||||| ||||| |||| | ||||||||
Sbjct: 449 cggcagcaacatgggaggttgatggaactggcttggttactggtgttccctcctccatgt 508
Query: 890 accttctttctgctcaacaaactgccttccaaattggcaaagaaatttccattagttatg 949
|||||||||||||| |||||||| | || | | | ||||| |||| |||||||||||
Sbjct: 509 accttctttctgctgaacaaactcctatcaagacagagaaagagattttcattagttatg 568
Query: 950 gtaacaaaggcaatgaggagttactgtacctgtacggatttgtcattgaaaataatccag 1009
| || |||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||
Sbjct: 569 gaaataaaggcaatgaggagttactatacctgtacgggtttgtcattgacaataatacag 628
Query: 1010 atgactatcttatggtccattatcctgcagaggctattcaggatgttccattctcagact 1069
|||||||||| |||||| ||||||||| ||| || |||||| ||||||| || |||||||
Sbjct: 629 atgactatctcatggtcaattatcctgtagaagcaattcagaatgttcccttttcagact 688
Query: 1070 ccaaaatgcagcttctggaagcacagaaaggtgaactgcggtgtcttttgcctaaaagct 1129
|||||||||||||| ||||||||||||||| |||| ||||||||||||| || ||| |||
Sbjct: 689 ccaaaatgcagcttttggaagcacagaaagctgaaatgcggtgtcttttaccgaaaggct 748
Query: 1130 tgctggatcatggattttttccagtaggcaccccaaacaatgacaataatggtaaatgca 1189
||||||| ||||| |||||||||||||| ||| |||| ||||||| ||| ||| ||||
Sbjct: 749 tgctggaccatgggttttttccagtaggaacctcaaaaaatgacagcaattttaagtgca 808
Query: 1190 aaaatgatccagtttgcaacttcagttggagtggtcagcggaagacgccctcttacataa 1249
||| |||| | || |||||| ||||||||| |||||||| | ||||||||||| |||
Sbjct: 809 aaacagatcaatttggcaactgcagttggagcggtcagcgtgaaacgccctcttatgtaa 868
Query: 1250 ataagctggtctttcctgacgattttttaacttcattgaggaccatagccatgcaggaag 1309
|||||||||| ||||| || ||||||||||||||||||||||| |||| ||||||||||
Sbjct: 869 ataagctggtgtttccagaggattttttaacttcattgaggactttagctatgcaggaag 928
Query: 1310 atgagctatataaggtttcttcaatgctcgaagagcttgtagggtctgacggggagagac 1369
|||| |||||||| |||||||| |||| ||||||||| |||||||||| |||||||| |
Sbjct: 929 atgaactatataaagtttcttcgttgcttgaagagcttatagggtctgaaggggagaggc 988
Query: 1370 aaccgacagatacagaagttagagcagcaatatgggaggcctgtggagattctggagctt 1429
|||| |||||| |||||||||||||||| |||||||||||||||| ||||| |||||
Sbjct: 989 aaccaacagattcagaagttagagcagctgtatgggaggcctgtggggattccggagccc 1048
Query: 1430 tgcagttgcttgtagatcttcttcaagcgaagatggtggatctagaagagaattccagaa 1489
|||| |||||||| ||||| |||||| | ||| || || |||| |||||| ||| |||
Sbjct: 1049 tgcaattgcttgttgatctacttcaaaccaagttgttgaatcttgaagagggttctggaa 1108
Query: 1490 cagaggagtgtgattctgaactgctagaaagggcc 1524
||||||| || |||||||||||||| |||| ||||
Sbjct: 1109 cagaggactgcgattctgaactgctcgaaaaggcc 1143
Score = 208 bits (105), Expect = 8e-53
Identities = 234/277 (84%)
Strand = Plus / Plus
Query: 421 cagaagaaaaatctgctgtccctgtatgatgacaaagtaaagggtctgatgaagaaactt 480
||||||||||| ||||||| || || ||||||||||||||||| ||||||||||||||
Sbjct: 85 cagaagaaaaagttgctgtcgctctacgatgacaaagtaaagggcttgatgaagaaactt 144
Query: 481 ttaattctagatggtgattcagaaggtgaggtgtgttttgaagatttcctttgggcaaat 540
||| ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 145 ctaactctagatggggattcagaaagtgaggtgtcctttgaagattttctttgggcaaat 204
Query: 541 tctctattttggagtcgtgctttgaacattccgcttccacagtcttatgtatttccacaa 600
||| |||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct: 205 tctttattttggagccgtgctctgaacattccccttccacattcttatgtatttccacaa 264
Query: 601 attcaagaggatcaagccatcaactgttcggctaacaactctgaatcctcccataatgat 660
| |||| ||||||| | ||||||| | | | |||| || ||| ||||||||
Sbjct: 265 gtggaagaagatcaagaaaatcactgttcaacaatcgactcagagctatcctataatgat 324
Query: 661 aattcttgtgaagacttgcttaatgagaaggatgaaa 697
|||||| || ||||||| ||||||||||||||||||
Sbjct: 325 aattctgctggagacttgattaatgagaaggatgaaa 361
Score = 97.6 bits (49), Expect = 2e-19
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 1607 agttgatgagcagaaataaatgggctagcatagtatatagacgagggcaaaaggtgctca 1666
|||||||||| ||||| | | | ||||| || || ||||| |||||||||||| |||||
Sbjct: 1220 agttgatgagtagaaacagacgagctagtatcgtgtataggagagggcaaaaggagctca 1279
Query: 1667 ccagattatttctcaaggaagcagaacatgccttgcaactatctttgagtgaaggaa 1723
| |||||||| ||||||||||| || |||||||||||| |||||||||||| |||||
Sbjct: 1280 caagattattcctcaaggaagctgagcatgccttgcaattatctttgagtggaggaa 1336