Jatropha Genome Database

JcCA0080621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0080621.10 + phase: 0 /partial
         (804 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m001997 cation efflux protein/ zinc transporter, putative       420   e-117

>29647.m001997 cation efflux protein/ zinc transporter, putative
          Length = 1440

 Score =  420 bits (212), Expect = e-117
 Identities = 317/352 (90%)
 Strand = Plus / Plus

                                                                        
Query: 10   gggggctctattcttggaattaagtttctggatcctcttgctggacttgttgtctcgggc 69
            |||||||| |||||||| |||| |||||| |||||||| ||||||||| |||| || |||
Sbjct: 751  gggggctccattcttgggattaggtttctagatcctctcgctggacttcttgtttcaggc 810

                                                                        
Query: 70   atgatactgaaagctggactggaaattggataccagagtgtctttgaattggttgatgct 129
            ||||| ||||||||||||||||||| ||| |||||||||||||| ||| |||| ||||||
Sbjct: 811  atgatcctgaaagctggactggaaactgggtaccagagtgtcttggaactggtagatgct 870

                                                                        
Query: 130  gcaattccagcagaagatttggatcctgtaaggcaaacaatacttcaagttgaaggtgtc 189
            ||||||||||||||| ||||||||||| ||| |||||||||||| |||||||||| ||||
Sbjct: 871  gcaattccagcagaacatttggatcctataaagcaaacaatactacaagttgaagatgtc 930

                                                                        
Query: 190  aagggatgccatcgcttgagagggaggagggctggttcatctttacaccttgatgtacac 249
            |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| || 
Sbjct: 931  aagggatgccatcgtttgagaggaaggagggctggttcatctttacacctggatgtgcat 990

                                                                        
Query: 250  attgaggttgatcctttttctagtgttagtgctgcccatggaattggtgagaaggtccgc 309
            ||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||| || 
Sbjct: 991  attgaggttgatccttttcttagtgttagtgctgcccatgaaattggtgaaaaggttcgt 1050

                                                                
Query: 310  caggaaattcacaagtgccatcctggaatagctgaagtttttatacacatag 361
            |||||||||||| ||| | |||||| |||||||||||| |||||||||||||
Sbjct: 1051 caggaaattcacgagtcctatcctgaaatagctgaagtctttatacacatag 1102



 Score = 67.9 bits (34), Expect = 9e-11
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                        
Query: 430  tctttggaagacagggacattgaaatgatcgtttccaatgttttccagtcaaaatttcca 489
            |||||||| ||||  ||||||| ||||||  ||||||||  |||   |||||| || |||
Sbjct: 1165 tctttggatgacaaagacattgcaatgattatttccaatacttttttgtcaaagttccca 1224

                                              
Query: 490  gagagaatggaggttgagcgcataacacgccact 523
            |||| |||||||||||||||||| ||||||||||
Sbjct: 1225 gagaaaatggaggttgagcgcattacacgccact 1258