Jatropha Genome Database
- JcCA0080591.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080591.20 + phase: 0
(1323 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006271 conserved hypothetical protein 624 e-178
>30169.m006271 conserved hypothetical protein
Length = 1290
Score = 624 bits (315), Expect = e-178
Identities = 545/624 (87%)
Strand = Plus / Plus
Query: 1 atgggaatcagcttcaaatattgggatgagtgtgttgaaccccaggacatggaagcaatg 60
||||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1 atgggaatcagcttcaaattttgggatgagtgcgttgatcctcaggacatggaagcaatg 60
Query: 61 tggcgggaacctgaagtgcttactgaatggttagatgctggagagactaaaggacagaaa 120
||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 61 tggcgagaacctgaagtcaccactgaatggttagatgctggagaggttaaagggcagaaa 120
Query: 121 gttcacctttcacgggatccagatggacagccttatttgacacagaccgagatgaaggct 180
|||||||||| || ||||| |||||||| ||||||||||| || || ||||||||||||
Sbjct: 121 attcacctttcccgtgatcctgatggacaaccttatttgactcaaacggagatgaaggct 180
Query: 181 gtagctgaaattattgtccgcagacattttgactcgcagatccttccggctatgctctgt 240
|||||||| ||||||||||||||| ||||||| |||||||| ||||| | |||||| |||
Sbjct: 181 gtagctgatattattgtccgcagatattttgattcgcagattcttcctgatatgctatgt 240
Query: 241 gctattgctgaactagcaagtgacaggcagctgcttgctacaagatacgacnnnnnnnct 300
||||||||||||||||||||||| |||| |||||| ||||||| || ||| ||
Sbjct: 241 gctattgctgaactagcaagtgataggctgctgctcgctacaaattatgacaagaaaact 300
Query: 301 aagcagaccaccgttggaatcatgcaacttttaccagcaacgatggagtggcttatcaga 360
|||||||| ||| | |||||||||||| |||| ||| ||| |||||||| |||||
Sbjct: 301 aagcagactaccatgggaatcatgcaaattttgccaaaaacagcagagtggctagtcaga 360
Query: 361 gatttgggctaccgggtatataaaggagaaggaaatccagatattctttataggcctttt 420
|||||||| |||||| | ||| | | ||||| |||||||| ||||| ||||||||||||
Sbjct: 361 gatttggggtaccggatttatgacgtagaagagaatccagacattctatataggcctttt 420
Query: 421 gtaagtgtatattttggggctgcttaccttcaatggttatcaaattttgagcgacaagaa 480
|| ||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||||
Sbjct: 421 gtcagtgtatattttggggcagcttaccttaaatggttatcaaactttgagcaaaaagaa 480
Query: 481 agaagtgaagagtttgtagttagggcatataaaggtggtatagagaaggcaaatcataag 540
||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 481 agaagtgaagagtttgttgttagggcatataaaggtggtataaagaaggcaactcataag 540
Query: 541 tcaactttgcagcattggaaacgatacctttcagttaaagaaagtcttccatccagaaga 600
|| |||||||| |||||||||| || |||||||||||||||||||| |||| |||||||
Sbjct: 541 tcgactttgcactattggaaacggtatctttcagttaaagaaagtctcccattcagaaga 600
Query: 601 tttgttgatgatggtccttcagta 624
||||||||||||||||||||||||
Sbjct: 601 tttgttgatgatggtccttcagta 624
Score = 561 bits (283), Expect = e-159
Identities = 525/609 (86%), Gaps = 15/609 (2%)
Strand = Plus / Plus
Query: 715 tatgtatattgggactctagagcttctccagaggacatgcaagaaatgtggaataattct 774
|||||| |||||||||||| | |||| ||||| ||||||| || ||||||| |||| ||
Sbjct: 697 tatgtacattgggactctaaaacttccccagaagacatgctggagatgtggagtaatgct 756
Query: 775 gatgttgctagagagtggataaaatctggagaaaaacgtggaaaggtgcgcttttcactt 834
|||||| ||| |||||||| ||||||||||| | ||||||||| ||||||||||||| |
Sbjct: 757 gatgttactaaagagtggacgaaatctggagagagacgtggaaaagtgcgcttttcacat 816
Query: 835 gataaggacaagaggctgtatctttcccgggtagaagtgaagatagacctcatacaggca 894
|||||||||||||| | |||||||||||| ||||||| ||| |||
Sbjct: 817 gataaggacaagagaccatatctttcccggatagaagtaaag---------------gca 861
Query: 895 gttgctcaaacaattctttcaaagcactttagcacaagaggagttaaaccatcagtcctc 954
||||| ||| ||||||||||||| |||| || || || | ||||||||| ||| ||||
Sbjct: 862 gttgcagaaataattctttcaaagtacttcagtactagggcagttaaaccttcaatcctt 921
Query: 955 tgtgctcttgctgagatggttagttttcgatttgtgaatggtgttggacctcaaattgga 1014
|||||||||||||||||||||||| | || ||||||||||| |||||||| | | ||||
Sbjct: 922 tgtgctcttgctgagatggttagtatgcgttttgtgaatggggttggaccccggactgga 981
Query: 1015 ctaatgggaattgactactccacagctttctggctttacatggaattgggttatagggct 1074
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 982 ctaatgggaattgactactctacagctttctggctttacatggagttgggttatagggct 1041
Query: 1075 tacagagttgattctgttgatgatctaacaaagccatttgtgtccatgtactttggtgcg 1134
||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1042 tacagggttgactctgttgatgatctaacgaagccatttgtgtccatgtactttggtgcg 1101
Query: 1135 gcttatttggcatacctatccgaatatgaaggaagggaaagaactccacaatttgttgtt 1194
|| || | || || |||| |||||||| || ||||||||||||||||| |||||||||
Sbjct: 1102 gcctacctagcttatttatcagaatatgaggggagggaaagaactccacagtttgttgtt 1161
Query: 1195 caggcttatcttgctgggccaaagaatgtgaatcttcaggagactggtcccttttggctt 1254
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1162 caggcttatcttggtgggccaaagaatgtgaatcttcaggagactggtcctctttggctt 1221
Query: 1255 aaatttgaggaagctttgagcaattacgaagatataaagaaggatccaggaagctgcacc 1314
||||| ||| |||||||| | ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1222 aaattcgagcaagctttgggaaattatgaagatataaaaaaggatccaggaagctgcacc 1281
Query: 1315 attttgtaa 1323
|| ||||||
Sbjct: 1282 atcttgtaa 1290