Jatropha Genome Database

JcCA0080571.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0080571.10 + phase: 0 /partial
         (336 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29839.m000431 diphosphomevalonate decarboxylase, putative             394   e-109

>29839.m000431 diphosphomevalonate decarboxylase, putative
          Length = 1248

 Score =  394 bits (199), Expect = e-109
 Identities = 301/335 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtggcatatacatttgatgctgggcctaatgctgttctaattgcacaaaatagaaagact 60
            ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 910  gtggcttatacctttgatgctgggcctaatgcagttctaattgcacaaaatagaaagact 969

                                                                        
Query: 61   gctgcccagttgctgcagaagttgcttttctttttccctccaaattctgatactgattta 120
            |||| ||||||| |||||||| ||||||  | |||||| |||||||||||||||||||||
Sbjct: 970  gctgtccagttgttgcagaagctgctttattatttcccaccaaattctgatactgattta 1029

                                                                        
Query: 121  aacagttatgttattggtgataagtcaatactaaaagatgctgggattcaagagataaag 180
            |||||||||||| |||||||||| ||||| || ||||||||||| ||| ||||||| |||
Sbjct: 1030 aacagttatgttcttggtgataaatcaattctgaaagatgctggaattgaagagatgaag 1089

                                                                        
Query: 181  gatgtggaagcattgccaccacctccagaaattaaggatgcctcaagatacaaaggagat 240
            ||||||||| |||||||| ||||||||||||||||||||||| |||||| |||||| || 
Sbjct: 1090 gatgtggaatcattgccagcacctccagaaattaaggatgccccaagattcaaaggggac 1149

                                                                        
Query: 241  gttagttatttcatctgcacaagacctggcaggggtcctgttttgctctccgacgaaagt 300
            || ||||||||||||||||||||||| ||||| ||||||||||||||| | || ||||||
Sbjct: 1150 gtcagttatttcatctgcacaagacccggcagaggtcctgttttgctcactgatgaaagt 1209

                                               
Query: 301  catgctcttctcaatcccgaaactggtctgcctaa 335
            || ||||||||||| ||  ||||||| ||||||||
Sbjct: 1210 caggctcttctcaaccctcaaactgggctgcctaa 1244