Jatropha Genome Database
- JcCA0080501.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080501.20 - phase: 0
(1281 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29595.m000282 Protein kinase APK1A, chloroplast precursor, putative 373 e-102
>29595.m000282 Protein kinase APK1A, chloroplast precursor, putative
Length = 1260
Score = 373 bits (188), Expect = e-102
Identities = 834/1043 (79%), Gaps = 26/1043 (2%)
Strand = Plus / Plus
Query: 230 aagcttctctaccagaaagccctaacatttacaactttattgaaatttgtagggccacaa 289
|||||||| ||||||| | || |||||||||||||| | |||||||| | |||||||
Sbjct: 233 aagcttctttaccagagaatccaaacatttacaacttcagtgaaatttccaaagccacaa 292
Query: 290 acaactttctatcaaaacctttttcttcttcctcttcttccacttcttggcgctgtcaga 349
||||||| || |||||||| ||||||||||| || ||| |||| ||||||||||| || |
Sbjct: 293 acaacttcctctcaaaacccttttcttcttcttcctctgccacctcttggcgctgccata 352
Query: 350 ttcgccagaaagaggtgattcttacccagcgaaaattccgtcaccgtgacccaatccagt 409
||||| | ||||||||| ||||| |||| |||| |||| ||| ||||| || | |
Sbjct: 353 ttcgcaataaagaggtggttcttgtccagagaaagctccg---ccgcgaccccatagaat 409
Query: 410 taccggagctccaacaacggttatccacaatttgccggagtcatcacagtagtttagtta 469
| || ||||| || || |||||||||| || || | | |||||||||||| || |||
Sbjct: 410 tgcctgagctgcagcagaggttatccaccatctgtagaactcatcacagtagcttgatta 469
Query: 470 agcttcttggcgccaccacttcaggaaattgtatatatcttgtttatgaatacgttcatg 529
||||| | || || |||||||||| | || | |||||||||| ||||| || ||||||
Sbjct: 470 agcttttgggtgcttccacttcagggagttatgtatatcttgtatatgagtatattcatg 529
Query: 530 gggctaatttagctacttgtttaagaaacccacaaaatcgtaattacacgattctttcaa 589
| ||||| ||| |||||||| | |||| |||||||||| |||||||| || | ||||
Sbjct: 530 gtgctaacttatctacttgtctgcgaaatccacaaaatcccaattacacagttttgtcaa 589
Query: 590 attggttatcccgaatgcaaattgctacagatattgctcacgggctcgattacatccacc 649
||||| |||| ||||||||||||| |||||||| ||||||||||| ||||| || ||||
Sbjct: 590 attgggtatcaagaatgcaaattgcaacagatatagctcacgggcttgattatatacacc 649
Query: 650 attgtacggattcgggttcaggttcgggttttgtgcacaaccatataaagtgttcgagca 709
| ||||| ||| | ||||| || ||||| || ||||||||||| |||||||
Sbjct: 650 actgtacagatcaagattcag--tc----tttgttcataaccatataaaaagttcgagtg 703
Query: 710 ttattataactgaagatccattaaacgcaaagatttgtcattttggtacggcggagcttt 769
|||| || |||||||| ||||||| |||||||||||||||||||| ||||| ||||| |
Sbjct: 704 ttatagtatctgaagattcattaaatgcaaagatttgtcattttgggacggctgagctgt 763
Query: 770 gtggagaaattgatggaagtgaaagaaggtcaagaagtcttgacc-ggagtgacagtaaa 828
|||||||||| || | || || | | | | |||| || || ||||| ||||||
Sbjct: 764 gtggagaaatgga-gaaattggagg-----cgaaaagt-ttaactaggagtagtagtaaa 816
Query: 829 ggaaagaaaattgaagggacaagagggtatatgtcgccggaatttcaagaaagtggagtt 888
|| | |||||||||||||||||||||||| ||| |||| || ||||||| ||||||||||
Sbjct: 817 ggtatgaaaattgaagggacaagagggtacatggcgccagagtttcaagcaagtggagtt 876
Query: 889 gtgacgcagaaaagtgatgtgtatgcttttggagtggtggttttggagctagtgtcaggg 948
||||| |||||| ||||||||||||||| || ||||||||||||||| | || |||||
Sbjct: 877 gtgacacagaaatctgatgtgtatgctttcggggtggtggttttggagttggtttcagga 936
Query: 949 gaagaggcgttgaggtatgtgtttgatgaagggagtggagggtttaggagagttagtgtt 1008
|| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 937 gaggaggcattgaggtatgtgtttgatgaagggagtggagggtttaggagggttagtgtg 996
Query: 1009 attgagagggcaagagaggtggtgggtagcggtgaaggcggaggcaatcgtattaggagt 1068
||||| |||| | | | | ||||| ||| |||| |||| | | | ||||||
Sbjct: 997 attgaaggggcgaaaaacgcggtggctagtggtg-----ggag----tggggtgaggagt 1047
Query: 1069 tgggtggatagaagattgaaggattcttatccggtggaggtggcggagaagatggtcttg 1128
||||| ||||| || |||| |||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1048 tgggtagataggaggttgagggattcatatccggtggaggtggctgagaagatggtgtta 1107
Query: 1129 attgggttggagtgtgcggaggaggacccggaaaaaaggccggatatggaacaagtcgcc 1188
| |||||||| |||| |||||| | ||||| || ||||||||||||| || || ||
Sbjct: 1108 gtagggttggaatgtgtggaggaacaaccggagaagcggccggatatggagcaggttgct 1167
Query: 1189 gttagaatttcaaaattgtatttggaatcaaagaattgggcagagagaattggtatgcct 1248
||| | || || |||||||||||||| ||||||||||| |||| ||||||| ||||
Sbjct: 1168 actagggtgtctaagttgtatttggaatccaagaattgggctgagaaaattggtgtgcca 1227
Query: 1249 attgatttctctgtttctatggc 1271
|||||||| ||||| ||||||||
Sbjct: 1228 attgatttttctgtatctatggc 1250
Score = 83.8 bits (42), Expect = 2e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 atgtgtagatcaaaaaagagcacaaacataatccaatctctaaccccaaaatcccaccat 60
||||| |||||||||| |||||||| |||||||||||||||| |||||||||| ||||||
Sbjct: 1 atgtgcagatcaaaaaggagcacaagcataatccaatctctatccccaaaatcacaccat 60
Query: 61 tc 62
||
Sbjct: 61 tc 62