Jatropha Genome Database

JcCA0080501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0080501.10 + phase: 0 /partial
         (257 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29595.m000284 conserved hypothetical protein                          218   1e-56

>29595.m000284 conserved hypothetical protein
          Length = 600

 Score =  218 bits (110), Expect = 1e-56
 Identities = 215/250 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcttcacctgcaaggtctgtgagacaaggtccataaagacagcttgtcgcgattca 60
           |||||||| ||||||||||||||||||||||| ||  | ||||||  ||| || || |||
Sbjct: 340 atgatctttacctgcaaggtctgtgagacaagatctgtcaagacaatttgccgtgaatca 399

                                                                       
Query: 61  tatgagaaaggtgtagtggttgcacgttgtggtggctgtaataacctacatctgatcgca 120
           || |||||||| || ||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 400 tacgagaaaggcgtggtggtggcacgttgtggtggctgtaataacctacacctgatagca 459

                                                                       
Query: 121 gatcacctcgggtggtttggagaaccgggaagcatcgaggatttcctagctgctcgtggg 180
           |||| ||| || |||||||||||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 460 gatcgccttggatggtttggagaaccaggaagcattgaggacttcctggctgcccgcggg 519

                                                                       
Query: 181 gaggaagttaaaaaaggttctattgatacgctgaatttaactctggaagatttagctgga 240
           |||||||| | |||||||||||  ||||| || ||||||||||| || ||||||||||||
Sbjct: 520 gaggaagtgagaaaaggttctacagatactcttaatttaactctcgaggatttagctgga 579

                     
Query: 241 agcaacatct 250
           | ||| ||||
Sbjct: 580 aacaaaatct 589